RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 CYP3A5P20815 502 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 DYNLT1P63172 113 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 FASTKD3Q14CZ7 662 aaKnown RBP16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 LRRC14Q15048 493 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 SPRED3Q2MJR0 410 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 CCDC121Q6ZUS5 278 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 BBS12Q6ZW61 710 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 CMASQ8NFW8 434 aaPredicted RBP16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 ACAP3Q96P50 834 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 DPP3Q9NY33 737 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 BARX2Q9UMQ3 279 aaPredicted RBP16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 CAPN7Q9Y6W3 813 aa16.91■□□□□ 0.3
SCNN1A-221ENST00000543768 PDHXO00330 501 aa16.9■□□□□ 0.3
SCNN1A-221ENST00000543768 MIPP30301 263 aa16.9■□□□□ 0.3
SCNN1A-221ENST00000543768 NDST1P52848 882 aa16.9■□□□□ 0.3
SCNN1A-221ENST00000543768 MYO1EQ12965 1108 aa16.9■□□□□ 0.3
SCNN1A-221ENST00000543768 TAF5Q15542 800 aa16.9■□□□□ 0.3
SCNN1A-221ENST00000543768 FBXW10Q5XX13 1052 aa16.9■□□□□ 0.3
SCNN1A-221ENST00000543768 CNPY4Q8N129 248 aa16.9■□□□□ 0.3
SCNN1A-221ENST00000543768 UBA3Q8TBC4 463 aa16.9■□□□□ 0.3
SCNN1A-221ENST00000543768 CCDC77Q9BR77 488 aa16.9■□□□□ 0.3
SCNN1A-221ENST00000543768 PCSK1NQ9UHG2 260 aa16.9■□□□□ 0.3
SCNN1A-221ENST00000543768 ITGA11Q9UKX5 1188 aa16.9■□□□□ 0.3
SCNN1A-221ENST00000543768 STAU1O95793 577 aaKnown RBP16.89■□□□□ 0.3
SCNN1A-221ENST00000543768 IFNB1P01574 187 aa16.89■□□□□ 0.3
SCNN1A-221ENST00000543768 GCAP28676 217 aa16.89■□□□□ 0.3
SCNN1A-221ENST00000543768 RBP5P82980 135 aa16.89■□□□□ 0.3
SCNN1A-221ENST00000543768 ACAP1Q15027 740 aa16.89■□□□□ 0.3
SCNN1A-221ENST00000543768 ZNF467Q7Z7K2 595 aaPredicted RBP16.89■□□□□ 0.3
SCNN1A-221ENST00000543768 MGARPQ8TDB4 240 aa16.89■□□□□ 0.3
SCNN1A-221ENST00000543768 MS4A4AQ96JQ5 239 aa16.89■□□□□ 0.3
SCNN1A-221ENST00000543768 CFAP57Q96MR6 1250 aa16.89■□□□□ 0.3
SCNN1A-221ENST00000543768 C10orf88Q9H8K7 445 aa16.89■□□□□ 0.3
SCNN1A-221ENST00000543768 TRUB2O95900 331 aaKnown RBP16.89■□□□□ 0.29
SCNN1A-221ENST00000543768 BRAFP15056 766 aa16.89■□□□□ 0.29
SCNN1A-221ENST00000543768 GDF10P55107 478 aa16.89■□□□□ 0.29
SCNN1A-221ENST00000543768 ACTN3Q08043 901 aaPredicted RBP16.89■□□□□ 0.29
SCNN1A-221ENST00000543768 GRIK4Q16099 956 aa16.89■□□□□ 0.29
SCNN1A-221ENST00000543768 TTC13Q8NBP0 860 aa16.89■□□□□ 0.29
SCNN1A-221ENST00000543768 CCDC197Q8NCU1 140 aa16.89■□□□□ 0.29
SCNN1A-221ENST00000543768 MAML1Q92585 1016 aa16.89■□□□□ 0.29
SCNN1A-221ENST00000543768 PRCCQ92733 491 aaPredicted RBP16.89■□□□□ 0.29
SCNN1A-221ENST00000543768 FRMD8P1Q9BZ68 369 aaPredicted RBP16.89■□□□□ 0.29
SCNN1A-221ENST00000543768 KCNK9Q9NPC2 374 aa16.89■□□□□ 0.29
SCNN1A-221ENST00000543768 USP18Q9UMW8 372 aa16.89■□□□□ 0.29
SCNN1A-221ENST00000543768 SHOC2Q9UQ13 582 aa16.89■□□□□ 0.29
SCNN1A-221ENST00000543768 FARP1Q9Y4F1 1045 aaPredicted RBP16.89■□□□□ 0.29
SCNN1A-221ENST00000543768 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.89■□□□□ 0.29
SCNN1A-221ENST00000543768 SCN1AP35498 2009 aa16.89■□□□□ 0.29
SCNN1A-221ENST00000543768 BTBD19C9JJ37 291 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 DNM1LO00429 736 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 ALOX15BO15296 676 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 STRNO43815 780 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 VIMP08670 466 aaKnown RBP16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 HP1BP3Q5SSJ5 553 aaPredicted RBP16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 FAM102AQ5T9C2 384 aaPredicted RBP16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 TRNP1Q6NT89 227 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 CCT6BQ92526 530 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 TTC25Q96NG3 672 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 ADPGKQ9BRR6 497 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 CXCL16Q9H2A7 254 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 RNF8O76064 485 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 PFKMP08237 780 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 SMPD1P17405 629 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 SH3PXD2AQ5TCZ1 1133 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 LCLAT1Q6UWP7 414 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 DPH6Q7L8W6 267 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 NT5DC4Q86YG4 428 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 RIBC1Q8N443 379 aaPredicted RBP16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 KCTD6Q8NC69 237 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 PEBP4Q96S96 227 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 ELAC2Q9BQ52 826 aaKnown RBP16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 TSPAN16Q9UKR8 245 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 ACTL7BQ9Y614 415 aa16.88■□□□□ 0.29
SCNN1A-221ENST00000543768 HOXD8P13378 290 aaPredicted RBP16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 GRM5P41594 1212 aa16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 ZNF143P52747 638 aaPredicted RBP16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 ANKRD20A8PQ5CZ79 823 aa16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 CYP4V2Q6ZWL3 525 aaPredicted RBP16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 RPAINQ86UA6 219 aa16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 SRRM1Q8IYB3 904 aaKnown RBP16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 C12orf29Q8N999 325 aa16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 ANKRD42Q8N9B4 389 aa16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 DYDC1Q8WWB3 177 aa16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 KIF12Q96FN5 646 aa16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 PIWIL1Q96J94 861 aaKnown RBP16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 SYT17Q9BSW7 474 aa16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 FAM124BQ9H5Z6 455 aaPredicted RBP16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 MLXIPLQ9NP71 852 aa16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 ASNSD1Q9NWL6 643 aa16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 MORF4L1Q9UBU8 362 aa16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 GOLGA6L7A0A1B0GV03 622 aa16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 EXOC1LA0A1B0GW35 172 aa16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 C2CD4BA6NLJ0 364 aa16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 PIK3R2O00459 728 aa16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 ENDOD1O94919 500 aa16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 MMP3P08254 477 aa16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 PCK1P35558 622 aa16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 DUSP28Q4G0W2 176 aa16.87■□□□□ 0.29
SCNN1A-221ENST00000543768 LACTB2Q53H82 288 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms