RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ASB3Q9Y575 518 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 NME7Q9Y5B8 376 aa6.7□□□□□ -1.34
LTBR-212ENST00000543542 EYSQ5T1H1 3165 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 A0A1W2PQC6 194 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 SLC38A8A6NNN8 435 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 F8VP50 259 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 M0QYV0 167 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 RNF225M0QZC1 329 aaPredicted RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 FOXN3O00409 490 aaPredicted RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 ZNF197O14709 1029 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 CYP26A1O43174 497 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 MBTPS2O43462 519 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 GFPT2O94808 682 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 ABL1P00519 1130 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 CALCAP01258 141 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 CCDC172P0C7W6 258 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 PNMA6AP0CW24 399 aaPredicted RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 CSH1P0DML2 217 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 CSH2P0DML3 217 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 ACO1P21399 889 aaKnown RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 SP100P23497 879 aaPredicted RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 FSHRP23945 695 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 BRD2P25440 801 aaKnown RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 GBP2P32456 591 aaPredicted RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 SSTR3P32745 418 aaPredicted RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 KRT9P35527 623 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 PDE6CP51160 858 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 MRPS5P82675 430 aaKnown RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 ARID5AQ03989 594 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 CBX2Q14781 532 aaPredicted RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 NR1I3Q14994 352 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 STILQ15468 1287 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 LEXMQ3ZCV2 418 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 PABPC1LQ4VXU2 614 aaKnown RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 CYP26C1Q6V0L0 522 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 DENND5BQ6ZUT9 1274 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 GET4Q7L5D6 327 aaPredicted RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 APTXQ7Z2E3 356 aaKnown RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 GPIHBP1Q8IV16 184 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 FUKQ8N0W3 1084 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 STKLD1Q8NE28 680 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 ZNF397Q8NF99 534 aaPredicted RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 CMASQ8NFW8 434 aaPredicted RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 UBA3Q8TBC4 463 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 CPLX3Q8WVH0 158 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 MSLNLQ96KJ4 702 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 NECTIN4Q96NY8 510 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 PKMYT1Q99640 499 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 HNRNPABQ99729 332 aaKnown RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 NUP58Q9BVL2 599 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 STK33Q9BYT3 514 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 GANQ9H2C0 597 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 SLITRK6Q9H5Y7 841 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 DMAP1Q9NPF5 467 aaPredicted RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 SEPT11Q9NVA2 429 aaKnown RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 HCFC1R1Q9NWW0 138 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 CEP72Q9P209 647 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 AJAP1Q9UKB5 411 aaPredicted RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 TSPAN16Q9UKR8 245 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 SIK3Q9Y2K2 1263 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 MRPS23Q9Y3D9 190 aaKnown RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 USP15Q9Y4E8 981 aaPredicted RBP6.69□□□□□ -1.34
LTBR-212ENST00000543542 CEP83Q9Y592 693 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.69□□□□□ -1.34
LTBR-212ENST00000543542 C2orf16Q68DN1 1984 aa6.69□□□□□ -1.34
LTBR-212ENST00000543542 PTPRDP23468 1912 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 GRXCR2A6NFK2 248 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 F8VZ95 297 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 MICAL2O94851 1124 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 RTN3O95197 1032 aaPredicted RBP6.68□□□□□ -1.34
LTBR-212ENST00000543542 VNN2O95498 520 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 FGF19O95750 216 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 RHOP08100 348 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 IL9P15248 144 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 NPR3P17342 541 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 ATF6P18850 670 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 GABRR2P28476 465 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 KCNQ1P51787 676 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 BCAT1P54687 386 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 NTHL1P78549 312 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 BST2Q10589 180 aaKnown RBP6.68□□□□□ -1.34
LTBR-212ENST00000543542 COL19A1Q14993 1142 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 ASIC2Q16515 512 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 TSR1Q2NL82 804 aaKnown RBP6.68□□□□□ -1.34
LTBR-212ENST00000543542 ARHGAP15Q53QZ3 475 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 TAF3Q5VWG9 929 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 ARHGAP17Q68EM7 881 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 DNAJB7Q7Z6W7 309 aaPredicted RBP6.68□□□□□ -1.34
LTBR-212ENST00000543542 GAS2L3Q86XJ1 694 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 FMNL3Q8IVF7 1028 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 DRC7Q8IY82 874 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 HS6ST3Q8IZP7 471 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 NUP93Q8N1F7 819 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 UBR7Q8N806 425 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 ANKRD52Q8NB46 1076 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 LEMD2Q8NC56 503 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 SMRP1Q8NCR6 262 aa6.68□□□□□ -1.34
LTBR-212ENST00000543542 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.68□□□□□ -1.34
LTBR-212ENST00000543542 ATXN2LQ8WWM7 1075 aaKnown RBP6.68□□□□□ -1.34
LTBR-212ENST00000543542 ZNF606Q8WXB4 792 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms