RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 TCHHQ07283 1943 aa5.54□□□□□ -1.52
CLIP1-217ENST00000543205 LOXHD1Q8IVV2 1947 aa5.54□□□□□ -1.52
CLIP1-217ENST00000543205 LTBP2Q14767 1821 aa5.54□□□□□ -1.52
CLIP1-217ENST00000543205 FRMD3A2A2Y4 597 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 RBAK-RBAKDNI3L0D1 243 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 ACKR2O00590 384 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 MGEA5O60502 916 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 TSPAN1O60635 241 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 GCNT3O95395 438 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 STAG3L1P0CL83 205 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 ATP2A2P16615 1042 aaKnown RBP5.53□□□□□ -1.52
CLIP1-217ENST00000543205 NMT1P30419 496 aaKnown RBP5.53□□□□□ -1.52
CLIP1-217ENST00000543205 WDR5P61964 334 aaKnown RBP5.53□□□□□ -1.52
CLIP1-217ENST00000543205 COASYQ13057 564 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 POSTNQ15063 836 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 PTPN21Q16825 1174 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 FAM187BQ17R55 369 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 ATP13A4Q4VNC1 1196 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 NOTUMQ6P988 496 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.53□□□□□ -1.52
CLIP1-217ENST00000543205 STXBP4Q6ZWJ1 553 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 SLC24A5Q71RS6 500 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 ZNF720Q7Z2F6 126 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 MYOCDQ8IZQ8 938 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 NKAPQ8N5F7 415 aaKnown RBP5.53□□□□□ -1.52
CLIP1-217ENST00000543205 PHOSPHO2Q8TCD6 241 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 POF1BQ8WVV4 589 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 CCDC51Q96ER9 411 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 BICD1Q96G01 975 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 LRGUKQ96M69 825 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 SLC9A7Q96T83 725 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 DHRS4Q9BTZ2 278 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 PLVAPQ9BX97 442 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 MRPL4Q9BYD3 311 aaKnown RBP5.53□□□□□ -1.52
CLIP1-217ENST00000543205 FZD8Q9H461 694 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 RETREG1Q9H6L5 497 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 LMBRD1Q9NUN5 540 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 AGPAT5Q9NUQ2 364 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 EXOC1Q9NV70 894 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 ARHGAP28Q9P2N2 729 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 GPN3Q9UHW5 284 aaPredicted RBP5.53□□□□□ -1.52
CLIP1-217ENST00000543205 STXBP5LQ9Y2K9 1186 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 PCDHB7Q9Y5E2 793 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 DNAH12Q6ZR08 3092 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 TANC1Q9C0D5 1861 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 ADGRA3Q8IWK6 1321 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.53□□□□□ -1.52
CLIP1-217ENST00000543205 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.53□□□□□ -1.52
CLIP1-217ENST00000543205 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.53□□□□□ -1.52
CLIP1-217ENST00000543205 N4BP3O15049 544 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 B4GALT5O43286 388 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 SMC2O95347 1197 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 RPN1P04843 607 aaKnown RBP5.53□□□□□ -1.52
CLIP1-217ENST00000543205 PF4V1P10720 104 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 ARF4P18085 180 aaPredicted RBP5.53□□□□□ -1.52
CLIP1-217ENST00000543205 HOXA11P31270 313 aaPredicted RBP5.53□□□□□ -1.52
CLIP1-217ENST00000543205 MATR3P43243 847 aaKnown RBP eCLIP5.53□□□□□ -1.52
CLIP1-217ENST00000543205 DEFB103AP81534 67 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 ALCAMQ13740 583 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 TRIM14Q14142 442 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 GBX1Q14549 363 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 FAM209AQ5JX71 171 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 ATF7IP2Q5U623 682 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 RASIP1Q5U651 963 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 MZT2AQ6P582 158 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 RTN4RL1Q86UN2 441 aaPredicted RBP5.53□□□□□ -1.52
CLIP1-217ENST00000543205 ELOA2Q8IYF1 753 aaPredicted RBP5.53□□□□□ -1.52
CLIP1-217ENST00000543205 SYCP3Q8IZU3 236 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 DEFB123Q8N688 67 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 BEND7Q8N7W2 519 aaPredicted RBP5.53□□□□□ -1.52
CLIP1-217ENST00000543205 RNF169Q8NCN4 708 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 LINC01599Q8WXQ3 324 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 ADPGKQ9BRR6 497 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 TCHPQ9BT92 498 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 TRIM6Q9C030 488 aaPredicted RBP5.53□□□□□ -1.52
CLIP1-217ENST00000543205 ST6GALNAC4Q9H4F1 302 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 OLFML3Q9NRN5 406 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 KLHL11Q9NVR0 708 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 SUCOQ9UBS9 1254 aaKnown RBP5.53□□□□□ -1.52
CLIP1-217ENST00000543205 TBX20Q9UMR3 447 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 EXOC7Q9UPT5 735 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 SCN5AQ14524 2016 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 CNTNAP2Q9UHC6 1331 aa5.53□□□□□ -1.52
CLIP1-217ENST00000543205 A0A0U1RQF3 1178 aa5.52□□□□□ -1.53
CLIP1-217ENST00000543205 A0A1B0GUA9 196 aa5.52□□□□□ -1.53
CLIP1-217ENST00000543205 A0A1W2PQH9 124 aa5.52□□□□□ -1.53
CLIP1-217ENST00000543205 C9IYK1 514 aa5.52□□□□□ -1.53
CLIP1-217ENST00000543205 F5H423 210 aaPredicted RBP5.52□□□□□ -1.53
CLIP1-217ENST00000543205 NPTXRO95502 500 aa5.52□□□□□ -1.53
CLIP1-217ENST00000543205 MYBP10242 640 aa5.52□□□□□ -1.53
CLIP1-217ENST00000543205 ESRRAP11474 423 aaPredicted RBP5.52□□□□□ -1.53
CLIP1-217ENST00000543205 ARL4DP49703 201 aa5.52□□□□□ -1.53
CLIP1-217ENST00000543205 LIG4P49917 911 aa5.52□□□□□ -1.53
CLIP1-217ENST00000543205 FAM189BP81408 668 aa5.52□□□□□ -1.53
CLIP1-217ENST00000543205 GTF2BQ00403 316 aa5.52□□□□□ -1.53
CLIP1-217ENST00000543205 PNOCQ13519 176 aa5.52□□□□□ -1.53
CLIP1-217ENST00000543205 ELF2Q15723 593 aa5.52□□□□□ -1.53
CLIP1-217ENST00000543205 SLC10A6Q3KNW5 377 aa5.52□□□□□ -1.53
CLIP1-217ENST00000543205 DCAF4L1Q3SXM0 396 aa5.52□□□□□ -1.53
CLIP1-217ENST00000543205 MINDY4Q4G0A6 757 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms