RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, human

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFC5-209	ENST00000543153	TM6SF1	Q9BZW5	370 aa		11.18	□□□□□ -0.62
RFC5-209	ENST00000543153	CCDC113	Q9H0I3	377 aa		11.18	□□□□□ -0.62
RFC5-209	ENST00000543153	DHX33	Q9H6R0	707 aa	Known RBP	11.18	□□□□□ -0.62
RFC5-209	ENST00000543153	MINDY3	Q9H8M7	445 aa		11.18	□□□□□ -0.62
RFC5-209	ENST00000543153	UBN1	Q9NPG3	1134 aa		11.18	□□□□□ -0.62
RFC5-209	ENST00000543153	MAN1C1	Q9NR34	630 aa		11.18	□□□□□ -0.62
RFC5-209	ENST00000543153	RGL1	Q9NZL6	768 aa		11.18	□□□□□ -0.62
RFC5-209	ENST00000543153	DPP7	Q9UHL4	492 aa		11.18	□□□□□ -0.62
RFC5-209	ENST00000543153	CAPN6	Q9Y6Q1	641 aa		11.18	□□□□□ -0.62
RFC5-209	ENST00000543153	STK36	Q9NRP7	1315 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	WDFY4	Q6ZS81	3184 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	PRR19	A6NJB7	356 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	NRP1	O14786	923 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	TBX3	O15119	743 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	ASAP2	O43150	1006 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	EPB41L2	O43491	1005 aa	Known RBP	11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	B4GALT3	O60512	393 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	DTNB	O60941	627 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	LRRN2	O75325	713 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	DDHD2	O94830	711 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	GLUD1	P00367	558 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	CEACAM5	P06731	702 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	CNP	P09543	421 aa	Known RBP	11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	MYB	P10242	640 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	KRT2	P35908	639 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	CLCN4	P51793	760 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	ZNF143	P52747	638 aa	Predicted RBP	11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	SCRN1	Q12765	414 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	MXD4	Q14582	209 aa	Predicted RBP	11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	NPY5R	Q15761	445 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	FERMT3	Q86UX7	667 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	C4orf19	Q8IY42	314 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	NETO1	Q8TDF5	533 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	SLC22A17	Q8WUG5	538 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	CPB2	Q96IY4	423 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	KLHL5	Q96PQ7	755 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	GJB4	Q9NTQ9	266 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	ORC3	Q9UBD5	711 aa	Predicted RBP	11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	SSX2IP	Q9Y2D8	614 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	IPP	Q9Y573	584 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	TRIO	O75962	3097 aa		11.17	□□□□□ -0.62
RFC5-209	ENST00000543153	ANKRD34B	A5PLL1	514 aa		11.16	□□□□□ -0.62
RFC5-209	ENST00000543153	ARL5C	A6NH57	179 aa		11.16	□□□□□ -0.62
RFC5-209	ENST00000543153		B2RBV5	119 aa		11.16	□□□□□ -0.62
RFC5-209	ENST00000543153	SOD2	P04179	222 aa		11.16	□□□□□ -0.62
RFC5-209	ENST00000543153	NCL	P19338	710 aa	Known RBP	11.16	□□□□□ -0.62
RFC5-209	ENST00000543153	GLUD2	P49448	558 aa		11.16	□□□□□ -0.62
RFC5-209	ENST00000543153	SCNN1G	P51170	649 aa		11.16	□□□□□ -0.62
RFC5-209	ENST00000543153	TRIM29	Q14134	588 aa		11.16	□□□□□ -0.62
RFC5-209	ENST00000543153	GPR149	Q86SP6	731 aa		11.16	□□□□□ -0.62
RFC5-209	ENST00000543153	TMEM105	Q8N8V8	129 aa		11.16	□□□□□ -0.62
RFC5-209	ENST00000543153	STAM	Q92783	540 aa		11.16	□□□□□ -0.62
RFC5-209	ENST00000543153	MRFAP1L1	Q96HT8	127 aa		11.16	□□□□□ -0.62
RFC5-209	ENST00000543153		Q96M66	194 aa		11.16	□□□□□ -0.62
RFC5-209	ENST00000543153	RPS6KC1	Q96S38	1066 aa		11.16	□□□□□ -0.62
RFC5-209	ENST00000543153	GAD1	Q99259	594 aa		11.16	□□□□□ -0.62
RFC5-209	ENST00000543153	VN1R3	Q9BXE9	311 aa		11.16	□□□□□ -0.62
RFC5-209	ENST00000543153	EIF2A	Q9BY44	585 aa	Known RBP	11.16	□□□□□ -0.62
RFC5-209	ENST00000543153	TRIT1	Q9H3H1	467 aa	Known RBP	11.16	□□□□□ -0.62
RFC5-209	ENST00000543153	HES2	Q9Y543	173 aa		11.16	□□□□□ -0.62
RFC5-209	ENST00000543153	TSPAN1	O60635	241 aa		11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	AXL	P30530	894 aa		11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	HOXA11	P31270	313 aa	Predicted RBP	11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	TNK2	Q07912	1038 aa		11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	TDG	Q13569	410 aa		11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	ANKRD1	Q15327	319 aa		11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	CALCRL	Q16602	461 aa		11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	IFI16	Q16666	785 aa	Known RBP	11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	CLEC16A	Q2KHT3	1053 aa		11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	UBXN11	Q5T124	520 aa		11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	C15orf39	Q6ZRI6	1047 aa		11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	ADAT2	Q7Z6V5	191 aa	Known RBP	11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	MRPL10	Q7Z7H8	261 aa	Known RBP	11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	HAS1	Q92839	578 aa		11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	CCDC51	Q96ER9	411 aa		11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	DEPDC7	Q96QD5	511 aa		11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	HERC2P3	Q9BVR0	1158 aa		11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	CSRNP2	Q9H175	543 aa		11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	GPATCH2	Q9NW75	528 aa		11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	TPCN1	Q9ULQ1	816 aa		11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	PCDHA12	Q9UN75	941 aa		11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	MSRB2	Q9Y3D2	182 aa		11.15	□□□□□ -0.62
RFC5-209	ENST00000543153	KMT2E	Q8IZD2	1858 aa		11.15	□□□□□ -0.63
RFC5-209	ENST00000543153	CLUH	O75153	1309 aa		11.14	□□□□□ -0.63
RFC5-209	ENST00000543153	CCDC195	A0A1B0GUA6	201 aa		11.14	□□□□□ -0.63
RFC5-209	ENST00000543153	LRRIQ4	A6NIV6	560 aa		11.14	□□□□□ -0.63
RFC5-209	ENST00000543153	INPPL1	O15357	1258 aa		11.14	□□□□□ -0.63
RFC5-209	ENST00000543153	TEX28	O15482	410 aa		11.14	□□□□□ -0.63
RFC5-209	ENST00000543153	PDPK1	O15530	556 aa		11.14	□□□□□ -0.63
RFC5-209	ENST00000543153	NEMF	O60524	1076 aa		11.14	□□□□□ -0.63
RFC5-209	ENST00000543153	USO1	O60763	962 aa	Known RBP	11.14	□□□□□ -0.63
RFC5-209	ENST00000543153	PFKFB2	O60825	505 aa		11.14	□□□□□ -0.63
RFC5-209	ENST00000543153	PPM1B	O75688	479 aa		11.14	□□□□□ -0.63
RFC5-209	ENST00000543153	NPTXR	O95502	500 aa		11.14	□□□□□ -0.63
RFC5-209	ENST00000543153	TGFB1	P01137	390 aa		11.14	□□□□□ -0.63
RFC5-209	ENST00000543153	TXK	P42681	527 aa		11.14	□□□□□ -0.63
RFC5-209	ENST00000543153	CLCN7	P51798	805 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms