RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 MTMR12Q9C0I1 747 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 LRRC27Q9C0I9 530 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 INTS13Q9NVM9 706 aa12.71□□□□□ -0.37
PTPN6-219ENST00000542848 DUS2Q9NX74 493 aaKnown RBP12.71□□□□□ -0.37
PTPN6-219ENST00000542848 A0A087X0B3 334 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 ZNF233A6NK53 670 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 RNF40O75150 1001 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 EGFP01133 1207 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 TNNC2P02585 160 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 ADRB1P08588 477 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 ZNF806P0C7X5 589 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 TCF3P15923 654 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 PFKLP17858 780 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 GJA4P35212 333 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 MAPRE1Q15691 268 aaKnown RBP12.7□□□□□ -0.38
PTPN6-219ENST00000542848 ZNF77Q15935 545 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 DUOXA2Q1HG44 320 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 SCN4BQ8IWT1 228 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 DDX1Q92499 740 aaKnown RBP12.7□□□□□ -0.38
PTPN6-219ENST00000542848 ATP2A3Q93084 1043 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 SNX21Q969T3 373 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 INTS4Q96HW7 963 aaKnown RBP12.7□□□□□ -0.38
PTPN6-219ENST00000542848 HPDLQ96IR7 371 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 ZC3H10Q96K80 434 aaKnown RBP12.7□□□□□ -0.38
PTPN6-219ENST00000542848 SPATA17Q96L03 361 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 CNTNAP3BQ96NU0 1288 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 USP28Q96RU2 1077 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 CYP2S1Q96SQ9 504 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 CNTNAP3Q9BZ76 1288 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 ZSCAN16Q9H4T2 348 aaPredicted RBP12.7□□□□□ -0.38
PTPN6-219ENST00000542848 ECT2Q9H8V3 914 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 KIAA1586Q9HCI6 787 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 FBRSL1Q9HCM7 1045 aaKnown RBP12.7□□□□□ -0.38
PTPN6-219ENST00000542848 GCNT4Q9P109 453 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 MAGEC2Q9UBF1 373 aaPredicted RBP12.7□□□□□ -0.38
PTPN6-219ENST00000542848 CDH9Q9ULB4 789 aa12.7□□□□□ -0.38
PTPN6-219ENST00000542848 PLXND1Q9Y4D7 1925 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 AXIN1O15169 862 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 GDF9O60383 454 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 EPN2O95208 641 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 CKMP06732 381 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 FAM163BP0C2L3 166 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 CCDC192P0DO97 292 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 HDCP19113 662 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 IFNAR2P48551 515 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 PXNP49023 591 aaPredicted RBP12.69□□□□□ -0.38
PTPN6-219ENST00000542848 PDE6CP51160 858 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 LIMK1P53667 647 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 USP4Q13107 963 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 NR1H3Q13133 447 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 EML3Q32P44 896 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 PPM1JQ5JR12 505 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 VSTM1Q6UX27 236 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 SYT13Q7L8C5 426 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 ARL14EPQ8N8R7 260 aaPredicted RBP12.69□□□□□ -0.38
PTPN6-219ENST00000542848 OR5B17Q8NGF7 314 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 CCDC26Q8TAB7 109 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 KBTBD7Q8WVZ9 684 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 CD101Q93033 1021 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 FAM84AQ96KN4 292 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 SLC22A12Q96S37 553 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 SYT15Q9BQS2 421 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 ARRDC1-AS1Q9H2J1 176 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 TNMDQ9H2S6 317 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 TRPC7Q9HCX4 862 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 PCDHGA5Q9Y5G8 931 aa12.69□□□□□ -0.38
PTPN6-219ENST00000542848 C2orf78A6NCI8 922 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 HCRTO43612 131 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 ATP2C2O75185 946 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 WARSP23381 471 aaKnown RBP12.68□□□□□ -0.38
PTPN6-219ENST00000542848 LMO2P25791 158 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 NASPP49321 788 aaPredicted RBP12.68□□□□□ -0.38
PTPN6-219ENST00000542848 AMPD3Q01432 767 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 KCNB1Q14721 858 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 CCDC142Q17RM4 750 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 AASDHQ4L235 1098 aaPredicted RBP12.68□□□□□ -0.38
PTPN6-219ENST00000542848 LMBRD2Q68DH5 695 aaPredicted RBP12.68□□□□□ -0.38
PTPN6-219ENST00000542848 KBTBD6Q86V97 674 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 WDR49Q8IV35 697 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 PDILTQ8N807 584 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 KIAA1958Q8N8K9 716 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 ZNF507Q8TCN5 953 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 SH3RF2Q8TEC5 729 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 CUEDC2Q9H467 287 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 KBTBD4Q9NVX7 518 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 EHD2Q9NZN4 543 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 EBF1Q9UH73 591 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 ARHGAP26Q9UNA1 814 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 MTMR6Q9Y217 621 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 WNT6Q9Y6F9 365 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 GON4LQ3T8J9 2241 aa12.68□□□□□ -0.38
PTPN6-219ENST00000542848 TNRC6BQ9UPQ9 1833 aaKnown RBP12.67□□□□□ -0.38
PTPN6-219ENST00000542848 PTPRJQ12913 1337 aa12.67□□□□□ -0.38
PTPN6-219ENST00000542848 TRIM66O15016 1216 aa12.67□□□□□ -0.38
PTPN6-219ENST00000542848 EIF3DO15371 548 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTPN6-219ENST00000542848 STX6O43752 255 aa12.67□□□□□ -0.38
PTPN6-219ENST00000542848 PDGFRBP09619 1106 aa12.67□□□□□ -0.38
PTPN6-219ENST00000542848 BDNFP23560 247 aa12.67□□□□□ -0.38
PTPN6-219ENST00000542848 HOXD13P35453 343 aa12.67□□□□□ -0.38
PTPN6-219ENST00000542848 GRIK1P39086 918 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms