RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 ASTE1Q2TB18 679 aaPredicted RBP11.33□□□□□ -0.6
NPIPB3-210ENST00000542817 CLEC20AQ6ZU45 233 aa11.33□□□□□ -0.6
NPIPB3-210ENST00000542817 CACNA2D4Q7Z3S7 1137 aa11.33□□□□□ -0.6
NPIPB3-210ENST00000542817 ZNF571Q7Z3V5 609 aaPredicted RBP11.33□□□□□ -0.6
NPIPB3-210ENST00000542817 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.33□□□□□ -0.6
NPIPB3-210ENST00000542817 FAM35AQ86V20 835 aa11.33□□□□□ -0.6
NPIPB3-210ENST00000542817 IQCDQ96DY2 449 aa11.33□□□□□ -0.6
NPIPB3-210ENST00000542817 FUBP3Q96I24 572 aaKnown RBP eCLIP11.33□□□□□ -0.6
NPIPB3-210ENST00000542817 SPAG5Q96R06 1193 aa11.33□□□□□ -0.6
NPIPB3-210ENST00000542817 PPP1R9BQ96SB3 815 aa11.33□□□□□ -0.6
NPIPB3-210ENST00000542817 KCNK16Q96T55 309 aa11.33□□□□□ -0.6
NPIPB3-210ENST00000542817 ABCB6Q9NP58 842 aa11.33□□□□□ -0.6
NPIPB3-210ENST00000542817 CLEC1BQ9P126 229 aa11.33□□□□□ -0.6
NPIPB3-210ENST00000542817 ARHGAP20Q9P2F6 1191 aa11.33□□□□□ -0.6
NPIPB3-210ENST00000542817 HSFX1Q9UBD0 423 aa11.33□□□□□ -0.6
NPIPB3-210ENST00000542817 TSPAN16Q9UKR8 245 aa11.33□□□□□ -0.6
NPIPB3-210ENST00000542817 NENFQ9UMX5 172 aa11.33□□□□□ -0.6
NPIPB3-210ENST00000542817 PCDHGC3Q9UN70 934 aa11.33□□□□□ -0.6
NPIPB3-210ENST00000542817 LUC7L2Q9Y383 392 aaKnown RBP11.33□□□□□ -0.6
NPIPB3-210ENST00000542817 MUC3AQ02505 3323 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 TRIOO75962 3097 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 RFPL2O75678 378 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 GLUD1P00367 558 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 MMEP08473 750 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 CD19P15391 556 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 ADORA2BP29275 332 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 CDR2Q01850 454 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 CYP27A1Q02318 531 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 ARID5AQ03989 594 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 PTK2Q05397 1052 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 SMARCB1Q12824 385 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 ADAM15Q13444 863 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 DDR2Q16832 855 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 SGO2Q562F6 1265 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 SFMBT2Q5VUG0 894 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 SDHAF4Q5VUM1 108 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 SYCE2Q6PIF2 218 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 GPRIN1Q7Z2K8 1008 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 TMEM139Q8IV31 216 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 EFHBQ8N7U6 833 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 ANKRD52Q8NB46 1076 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 SPC24Q8NBT2 197 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 KREMEN2Q8NCW0 462 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 STKLD1Q8NE28 680 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 SLC30A5Q8TAD4 765 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 UBA3Q8TBC4 463 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 SPPL2BQ8TCT7 592 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 C2orf15Q8WU43 125 aaKnown RBP11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 SLC35F5Q8WV83 523 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 ZNF707Q96C28 371 aaPredicted RBP11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 CDCA3Q99618 268 aaPredicted RBP11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 CHP1Q99653 195 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 LRRC3Q9BY71 257 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 DUSP16Q9BY84 665 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 HAUS4Q9H6D7 363 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 ABHD10Q9NUJ1 306 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 ABI2Q9NYB9 513 aaPredicted RBP11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 MAFFQ9ULX9 164 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 PCDHB5Q9Y5E4 795 aa11.32□□□□□ -0.6
NPIPB3-210ENST00000542817 MTCL1Q9Y4B5 1905 aaKnown RBP11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 DOCK6Q96HP0 2047 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 AKR1B15C9JRZ8 316 aaPredicted RBP11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 F8VP50 259 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 DDX3XO00571 662 aaKnown RBP eCLIP11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 THAP12O43422 761 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 TBX10O75333 385 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 CYP1A1P04798 512 aaPredicted RBP11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 FERP16591 822 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 NPR3P17342 541 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 CDH5P33151 784 aaPredicted RBP11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 CA8P35219 290 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 USP46P62068 366 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 PDE4CQ08493 712 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 MAPRE1Q15691 268 aaKnown RBP11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 GOLGA7BQ2TAP0 167 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 LLGL2Q6P1M3 1020 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 POTEHQ6S545 545 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 C4orf50Q6ZRC1 276 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 BHLHA9Q7RTU4 235 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 PPFIBP1Q86W92 1011 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 SPATA2LQ8IUW3 424 aaPredicted RBP11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 OR8K1Q8NGG5 319 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 SECISBP2LQ93073 1101 aaKnown RBP11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 SMARCD1Q96GM5 515 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 C8orf48Q96LL4 319 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 AGPAT1Q99943 283 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 LHX5Q9H2C1 402 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 IGFLR1Q9H665 355 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 CYP4F11Q9HBI6 524 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 MAN1C1Q9NR34 630 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 KRT82Q9NSB4 513 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 IL37Q9NZH6 218 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 TJP2Q9UDY2 1190 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 YIPF1Q9Y548 306 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 INSL5Q9Y5Q6 135 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 NOTCH4Q99466 2003 aa11.31□□□□□ -0.6
NPIPB3-210ENST00000542817 ZMYND10O75800 440 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 AP1G2O75843 785 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 C8AP07357 584 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 UNGP13051 313 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms