RNA–Protein interactions for RNA: ENST00000542765.4

LDHB-209, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-209ENST00000542765 R3HDMLQ9H3Y0 253 aa4.27□□□□□ -1.73
LDHB-209ENST00000542765 RIOX1Q9H6W3 641 aa4.27□□□□□ -1.73
LDHB-209ENST00000542765 COL20A1Q9P218 1284 aa4.27□□□□□ -1.73
LDHB-209ENST00000542765 ZNHIT2Q9UHR6 403 aa4.27□□□□□ -1.73
LDHB-209ENST00000542765 DAAM1Q9Y4D1 1078 aa4.27□□□□□ -1.73
LDHB-209ENST00000542765 ADGRA2Q96PE1 1338 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 WDR27A2RRH5 827 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 TRIM43BA6NCK2 446 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 POM121BA6NF01 834 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 VWC2LB2RUY7 222 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 MPPED1O15442 326 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 CHRM2P08172 466 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 PDHA1P08559 390 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 MAPK10P53779 464 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 WNT3P56703 355 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 NXPH1P58417 271 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 RPS16P62249 146 aaKnown RBP4.26□□□□□ -1.73
LDHB-209ENST00000542765 MRPS35P82673 323 aaKnown RBP4.26□□□□□ -1.73
LDHB-209ENST00000542765 ZNF543Q08ER8 600 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 RAB32Q13637 225 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 ZNF169Q14929 603 aaPredicted RBP4.26□□□□□ -1.73
LDHB-209ENST00000542765 PTPRRQ15256 657 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 TXNRD1Q16881 649 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 CCDC142Q17RM4 750 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 ZNF362Q5T0B9 420 aaPredicted RBP4.26□□□□□ -1.73
LDHB-209ENST00000542765 ARHGAP40Q5TG30 622 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 KLHDC7AQ5VTJ3 777 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 C11orf96Q7Z7L8 435 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 PEG10Q86TG7 708 aaKnown RBP4.26□□□□□ -1.73
LDHB-209ENST00000542765 MORC1Q86VD1 984 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 MICU3Q86XE3 530 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 ZNF280BQ86YH2 543 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 FAM186BQ8IYM0 893 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.26□□□□□ -1.73
LDHB-209ENST00000542765 TFAP2BQ92481 460 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 TRIM43Q96BQ3 446 aaPredicted RBP4.26□□□□□ -1.73
LDHB-209ENST00000542765 NMD3Q96D46 503 aaKnown RBP4.26□□□□□ -1.73
LDHB-209ENST00000542765 PGBD1Q96JS3 809 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 RIPOR3Q96MK2 946 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 ZNF518BQ9C0D4 1074 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 BTBD1Q9H0C5 482 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 ZNF700Q9H0M5 742 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 SERHLQ9NQF3 203 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 FOXJ2Q9P0K8 574 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 LRIT1Q9P2V4 623 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 AFF4Q9UHB7 1163 aaKnown RBP4.26□□□□□ -1.73
LDHB-209ENST00000542765 SHOC2Q9UQ13 582 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 KAT6AQ92794 2004 aa4.26□□□□□ -1.73
LDHB-209ENST00000542765 ADM5C9JUS6 153 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 hCG_1984214I3L0E3 225 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 MGST3O14880 152 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 NCK2O43639 380 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 CYP2C9P11712 490 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 CXCR5P32302 372 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 STT3AP46977 705 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 SIM1P81133 766 aaPredicted RBP4.25□□□□□ -1.73
LDHB-209ENST00000542765 NBPF8Q3BBV2 869 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 ZIK1Q3SY52 487 aaPredicted RBP4.25□□□□□ -1.73
LDHB-209ENST00000542765 FAM209BQ5JX69 171 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 DCAF12L1Q5VU92 463 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 SFRP4Q6FHJ7 346 aaPredicted RBP4.25□□□□□ -1.73
LDHB-209ENST00000542765 XRRA1Q6P2D8 792 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 GAS2L3Q86XJ1 694 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 CCDC33Q8N5R6 958 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 SAMD3Q8N6K7 520 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 OR56A3Q8NH54 315 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 RAPGEF4Q8WZA2 1011 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 PDLIM2Q96JY6 352 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 PTDSS2Q9BVG9 487 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 STK31Q9BXU1 1019 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 MS4A7Q9GZW8 240 aaPredicted RBP4.25□□□□□ -1.73
LDHB-209ENST00000542765 KLC4Q9NSK0 619 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 TAGLN3Q9UI15 199 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 SERTAD3Q9UJW9 196 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 NDRG4Q9ULP0 352 aaKnown RBP4.25□□□□□ -1.73
LDHB-209ENST00000542765 SSX2IPQ9Y2D8 614 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 TBC1D30Q9Y2I9 924 aa4.25□□□□□ -1.73
LDHB-209ENST00000542765 MRPS17Q9Y2R5 130 aaKnown RBP4.25□□□□□ -1.73
LDHB-209ENST00000542765 ARID4BQ4LE39 1312 aaPredicted RBP4.24□□□□□ -1.73
LDHB-209ENST00000542765 COL11A2P13942 1736 aaPredicted RBP4.24□□□□□ -1.73
LDHB-209ENST00000542765 MBD3L4A6NDZ8 208 aaPredicted RBP4.24□□□□□ -1.73
LDHB-209ENST00000542765 MBD3L3A6NE82 208 aaPredicted RBP4.24□□□□□ -1.73
LDHB-209ENST00000542765 PPM1DO15297 605 aa4.24□□□□□ -1.73
LDHB-209ENST00000542765 IL18RAPO95256 599 aa4.24□□□□□ -1.73
LDHB-209ENST00000542765 LDHAP00338 332 aaKnown RBP4.24□□□□□ -1.73
LDHB-209ENST00000542765 PARP1P09874 1014 aaKnown RBP4.24□□□□□ -1.73
LDHB-209ENST00000542765 XRCC6P12956 609 aaKnown RBP eCLIP4.24□□□□□ -1.738e-7■■□□□ 11.8
LDHB-209ENST00000542765 TNFSF4P23510 183 aa4.24□□□□□ -1.73
LDHB-209ENST00000542765 PPIFP30405 207 aaKnown RBP4.24□□□□□ -1.73
LDHB-209ENST00000542765 RARRES1P49788 294 aa4.24□□□□□ -1.73
LDHB-209ENST00000542765 CASP5P51878 434 aa4.24□□□□□ -1.73
LDHB-209ENST00000542765 SP2Q02086 613 aa4.24□□□□□ -1.73
LDHB-209ENST00000542765 MYO1EQ12965 1108 aa4.24□□□□□ -1.73
LDHB-209ENST00000542765 EIF2B5Q13144 721 aaKnown RBP4.24□□□□□ -1.73
LDHB-209ENST00000542765 SLC44A4Q53GD3 710 aa4.24□□□□□ -1.73
LDHB-209ENST00000542765 PLA1AQ53H76 456 aa4.24□□□□□ -1.73
LDHB-209ENST00000542765 STRIP1Q5VSL9 837 aa4.24□□□□□ -1.73
LDHB-209ENST00000542765 ICE2Q659A1 982 aa4.24□□□□□ -1.73
LDHB-209ENST00000542765 KAZNQ674X7 775 aa4.24□□□□□ -1.73
LDHB-209ENST00000542765 RGS7BPQ6MZT1 257 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms