RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 CTXN3Q4LDR2 81 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 GPR158Q5T848 1215 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 TTC22Q5TAA0 569 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 MFSD4BQ5TF39 518 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 PEAR1Q5VY43 1037 aaPredicted RBP8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 NAIF1Q69YI7 327 aaPredicted RBP8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 ANO7Q6IWH7 933 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 SLC23A3Q6PIS1 610 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 MOXD1Q6UVY6 613 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 RNF19BQ6ZMZ0 732 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 GAREM2Q75VX8 874 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 ZNF605Q86T29 641 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 NOSTRINQ8IVI9 506 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 HDDC3Q8N4P3 179 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 ARL6IP6Q8N6S5 226 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 GIMAP1Q8WWP7 306 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 CCDC34Q96HJ3 373 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 CNOT6LQ96LI5 555 aaKnown RBP8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 TCEANC2Q96MN5 208 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 NCAPGQ9BPX3 1015 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 FAM83CQ9BQN1 747 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 FSCN3Q9NQT6 498 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 TMEM74BQ9NUR3 256 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 PRMT7Q9NVM4 692 aaPredicted RBP8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 RGL1Q9NZL6 768 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 TPCN1Q9ULQ1 816 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 GDAQ9Y2T3 454 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 TRIP11Q15643 1979 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 PI4KAP42356 2102 aa8.35□□□□□ -1.07
NPIPB4-215ENST00000542133 PTPRBP23467 1997 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 TMEM110-MUSTN1A8MSY1 372 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 C3orf80F5H4A9 247 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 TNFRSF10BO14763 440 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 OPHN1O60890 802 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 DGAT1O75907 488 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 EDN1P05305 212 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 CD59P13987 128 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 U2AF2P26368 475 aaKnown RBP eCLIP8.34□□□□□ -1.071e-39■■■□□ 16.3
NPIPB4-215ENST00000542133 WEE1P30291 646 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 ADD1P35611 737 aaKnown RBP8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 TSPAN7P41732 249 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 PTGER3P43115 390 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 ATXN3P54252 364 aaPredicted RBP8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 AMPD3Q01432 767 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 PLD1Q13393 1074 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 FAM187BQ17R55 369 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 SYCP2LQ5T4T6 812 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 CREB3L3Q68CJ9 461 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 CDCA2Q69YH5 1023 aaPredicted RBP8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 TRIM68Q6AZZ1 485 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 SKAP1Q86WV1 359 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 SYT12Q8IV01 421 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 BRSK2Q8IWQ3 736 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 ZNF843Q8N446 348 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 PNPLA1Q8N8W4 532 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 MDGA1Q8NFP4 955 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 BEST2Q8NFU1 509 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 OLIG1Q8TAK6 271 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 ZNF396Q96N95 335 aaPredicted RBP8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 P2RY13Q9BPV8 354 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 GTPBP2Q9BX10 602 aaKnown RBP8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 SRRTQ9BXP5 876 aaKnown RBP8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 SMG9Q9H0W8 520 aaKnown RBP8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 POLR3FQ9H1D9 316 aaPredicted RBP8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 CRISPLD1Q9H336 500 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 ATXN3LQ9H3M9 355 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 FZD8Q9H461 694 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 EBF3Q9H4W6 596 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 GDPD2Q9HCC8 539 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 KCNMB3Q9NPA1 279 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 GKN1Q9NS71 199 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 THG1LQ9NWX6 298 aaKnown RBP8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 COMMD8Q9NX08 183 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 VPS54Q9P1Q0 977 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 DDX25Q9UHL0 483 aaKnown RBP8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 PLXND1Q9Y4D7 1925 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 NID2Q14112 1375 aa8.34□□□□□ -1.07
NPIPB4-215ENST00000542133 SHROOM3Q8TF72 1996 aa8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 LRRIQ4A6NIV6 560 aa8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 J3QKU1 62 aa8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 PODXLO00592 558 aa8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 GPR37O15354 613 aa8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 PRPF3O43395 683 aaKnown RBP8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 CFIP05156 583 aa8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 GABRR2P28476 465 aa8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 GALK1P51570 392 aa8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 EPHB3P54753 998 aa8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 CYP4F8P98187 520 aa8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 CYP4A11Q02928 519 aa8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 CTTNQ14247 550 aaKnown RBP8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 EPHA7Q15375 998 aa8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 TRIP6Q15654 476 aaKnown RBP8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 MAPK6Q16659 721 aa8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 ARHGAP15Q53QZ3 475 aa8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 FAM133BQ5BKY9 247 aaKnown RBP8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 EEF1DP3Q658K8 133 aa8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 PADI6Q6TGC4 694 aa8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 LPCAT2Q7L5N7 544 aa8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 SCUBE3Q8IX30 993 aa8.33□□□□□ -1.08
NPIPB4-215ENST00000542133 MINDY1Q8N5J2 469 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms