RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 PLA1AQ53H76 456 aa3.91□□□□□ -1.78
USP28-210ENST00000542033 ARHGAP40Q5TG30 622 aa3.91□□□□□ -1.78
USP28-210ENST00000542033 VPS53Q5VIR6 699 aa3.91□□□□□ -1.78
USP28-210ENST00000542033 DCAF12L1Q5VU92 463 aa3.91□□□□□ -1.78
USP28-210ENST00000542033 SESTD1Q86VW0 696 aa3.91□□□□□ -1.78
USP28-210ENST00000542033 KRT78Q8N1N4 520 aa3.91□□□□□ -1.78
USP28-210ENST00000542033 CAGE1Q8TC20 777 aa3.91□□□□□ -1.78
USP28-210ENST00000542033 MAML1Q92585 1016 aa3.91□□□□□ -1.78
USP28-210ENST00000542033 SPSB4Q96A44 273 aa3.91□□□□□ -1.78
USP28-210ENST00000542033 ARPC5LQ9BPX5 153 aa3.91□□□□□ -1.78
USP28-210ENST00000542033 STK31Q9BXU1 1019 aa3.91□□□□□ -1.78
USP28-210ENST00000542033 AMBRA1Q9C0C7 1298 aa3.91□□□□□ -1.78
USP28-210ENST00000542033 PNPLA8Q9NP80 782 aa3.91□□□□□ -1.78
USP28-210ENST00000542033 HDAC9Q9UKV0 1011 aa3.91□□□□□ -1.78
USP28-210ENST00000542033 CORO2BQ9UQ03 480 aa3.91□□□□□ -1.78
USP28-210ENST00000542033 ZAR1LA6NP61 321 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 APAF1O14727 1248 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 PMM2O15305 246 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 NUDT3O95989 172 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 BMP5P22003 454 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 KLRC1P26715 233 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 MPLP40238 635 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 HTR3AP46098 478 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 HNRNPMP52272 730 aaKnown RBP eCLIP3.9□□□□□ -1.79
USP28-210ENST00000542033 PRKAG1P54619 331 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 FOXI1Q12951 378 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 DHX8Q14562 1220 aaKnown RBP3.9□□□□□ -1.79
USP28-210ENST00000542033 INSCQ1MX18 579 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 NBPF8Q3BBV2 869 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 TEDDM1Q5T9Z0 273 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 KAZNQ674X7 775 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 IL31Q6EBC2 164 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 RGS7BPQ6MZT1 257 aaPredicted RBP3.9□□□□□ -1.79
USP28-210ENST00000542033 OLFML1Q6UWY5 402 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 MICU3Q86XE3 530 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 GAS2L3Q86XJ1 694 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 DNAJC10Q8IXB1 793 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 SLC15A3Q8IY34 581 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 SPICE1Q8N0Z3 855 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.9□□□□□ -1.79
USP28-210ENST00000542033 GPR150Q8NGU9 434 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 OR56A3Q8NH54 315 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 ACTRT2Q8TDY3 377 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 SMCR8Q8TEV9 937 aaPredicted RBP3.9□□□□□ -1.79
USP28-210ENST00000542033 IPCEF1Q8WWN9 437 aaPredicted RBP3.9□□□□□ -1.79
USP28-210ENST00000542033 PHKBQ93100 1093 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 FKBP10Q96AY3 582 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 NAP1L5Q96NT1 182 aaPredicted RBP3.9□□□□□ -1.79
USP28-210ENST00000542033 PPP1R9BQ96SB3 815 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 STRBPQ96SI9 672 aaKnown RBP3.9□□□□□ -1.79
USP28-210ENST00000542033 ELAC2Q9BQ52 826 aaKnown RBP3.9□□□□□ -1.79
USP28-210ENST00000542033 MESP1Q9BRJ9 268 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 UNKQ9C0B0 810 aaKnown RBP3.9□□□□□ -1.79
USP28-210ENST00000542033 RIOX1Q9H6W3 641 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 COL20A1Q9P218 1284 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 SERTAD3Q9UJW9 196 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 ITGB1BP2Q9UKP3 347 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 INSL6Q9Y581 213 aa3.9□□□□□ -1.79
USP28-210ENST00000542033 LOC102723971A0A1B0GUV8 181 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 CCDC151A5D8V7 595 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 hCG_1984214I3L0E3 225 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 PPM1DO15297 605 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 MPPED1O15442 326 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 RHOP08100 348 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 TYRP1P17643 537 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 ADRA1BP35368 520 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 NEK3P51956 506 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 COL10A1Q03692 680 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 MYO1EQ12965 1108 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 EIF2B5Q13144 721 aaKnown RBP3.89□□□□□ -1.79
USP28-210ENST00000542033 PTPRRQ15256 657 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 TBCCQ15814 346 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 HSP90AB4PQ58FF6 505 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 CACHD1Q5VU97 1274 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 ZNF280BQ86YH2 543 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 YAF2Q8IY57 180 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 SPARTQ8N0X7 666 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 SDR16C5Q8N3Y7 309 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 FAM109AQ8N4B1 249 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 BPIFB1Q8TDL5 484 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 ATRIPQ8WXE1 791 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 TFAP2BQ92481 460 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 MSLNLQ96KJ4 702 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 CRAMP1Q96RY5 1269 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 DUSP26Q9BV47 211 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 ALG8Q9BVK2 526 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 UBA5Q9GZZ9 404 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 SERHLQ9NQF3 203 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 KLC4Q9NSK0 619 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 EHD3Q9NZN3 535 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 TAGLN3Q9UI15 199 aa3.89□□□□□ -1.79
USP28-210ENST00000542033 NDRG4Q9ULP0 352 aaKnown RBP3.89□□□□□ -1.79
USP28-210ENST00000542033 MRPS17Q9Y2R5 130 aaKnown RBP3.89□□□□□ -1.79
USP28-210ENST00000542033 KPNA5O15131 536 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 RGS10O43665 173 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 TLR5O60602 858 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 INMTO95050 263 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 NXPH3O95157 252 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 IL18RAPO95256 599 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms