RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ANO1Q5XXA6 986 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 STOX1Q6ZVD7 989 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 RASGRP2Q7LDG7 609 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 CXXC5Q7LFL8 322 aaKnown RBP6.13□□□□□ -1.43
CPSF7-220ENST00000541963 PROSER1Q86XN7 944 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 MB21D2Q8IYB1 491 aaPredicted RBP6.13□□□□□ -1.43
CPSF7-220ENST00000541963 MYO1HQ8N1T3 1032 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 DTX3Q8N9I9 347 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 PCSK9Q8NBP7 692 aaKnown RBP6.13□□□□□ -1.43
CPSF7-220ENST00000541963 DIS3LQ8TF46 1054 aaKnown RBP6.13□□□□□ -1.43
CPSF7-220ENST00000541963 JPH3Q8WXH2 748 aaPredicted RBP6.13□□□□□ -1.43
CPSF7-220ENST00000541963 QRSL1Q9H0R6 528 aaKnown RBP6.13□□□□□ -1.43
CPSF7-220ENST00000541963 CDH19Q9H159 772 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 OR10A5Q9H207 317 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 SEMA4AQ9H3S1 761 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 JMJD4Q9H9V9 463 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 MAD2L2Q9UI95 211 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 EDARQ9UNE0 448 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 MYOCOSA0A1B0GUC4 107 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 H0YGN5 161 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 SH2B2O14492 632 aaPredicted RBP6.12□□□□□ -1.43
CPSF7-220ENST00000541963 IL33O95760 270 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 MPIG6BO95866 241 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 SCGB1D2O95969 90 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 COL6A1P12109 1028 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 ATF2P15336 505 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 TAL1P17542 331 aaPredicted RBP6.12□□□□□ -1.43
CPSF7-220ENST00000541963 MC3RP41968 323 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 ALDH5A1P51649 535 aaPredicted RBP6.12□□□□□ -1.43
CPSF7-220ENST00000541963 RPS6P62753 249 aaKnown RBP6.12□□□□□ -1.43
CPSF7-220ENST00000541963 TNFAIP2Q03169 654 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 TROAPQ12815 778 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 SPIDRQ14159 915 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 MYBPC3Q14896 1274 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 NOLC1Q14978 699 aaKnown RBP eCLIP6.12□□□□□ -1.43
CPSF7-220ENST00000541963 PPP2R5BQ15173 497 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 LRRC41Q15345 812 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 QRICH1Q2TAL8 776 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 WDR72Q3MJ13 1102 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 LRSAM1Q6UWE0 723 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 SKAP1Q86WV1 359 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 KYQ8NBH2 561 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 NSUN6Q8TEA1 469 aaKnown RBP6.12□□□□□ -1.43
CPSF7-220ENST00000541963 UBE2Q2Q8WVN8 375 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 AUTS2Q8WXX7 1259 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 RRP36Q96EU6 259 aaKnown RBP6.12□□□□□ -1.43
CPSF7-220ENST00000541963 IWS1Q96ST2 819 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 TACO1Q9BSH4 297 aaKnown RBP6.12□□□□□ -1.43
CPSF7-220ENST00000541963 CPVLQ9H3G5 476 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 RIOX1Q9H6W3 641 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 LY9Q9HBG7 655 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 RBM28Q9NW13 759 aaKnown RBP6.12□□□□□ -1.43
CPSF7-220ENST00000541963 FTSJ1Q9UET6 329 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 SEC63Q9UGP8 760 aaKnown RBP6.12□□□□□ -1.43
CPSF7-220ENST00000541963 ZFP69BQ9UJL9 534 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 CROTQ9UKG9 612 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 Q9Y3F1 56 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 PCDHA1Q9Y5I3 950 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 GPR45Q9Y5Y3 372 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 CENPFP49454 3210 aa6.12□□□□□ -1.43
CPSF7-220ENST00000541963 CCDC196A0A1B0GTZ2 297 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 GCOM1H8Y6P7 765 aaPredicted RBP6.11□□□□□ -1.43
CPSF7-220ENST00000541963 NRP2O60462 931 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 RFPL1O75677 317 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 CABYRO75952 493 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 PCDH8O95206 1070 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 PGK1P00558 417 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 LPLP06858 475 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 POLR2MP0CAP2 368 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 HSPA4P34932 840 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 ITGA1P56199 1179 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 GJA9P57773 515 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 ANTXR2P58335 489 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 SRSF2Q01130 221 aaKnown RBP6.11□□□□□ -1.43
CPSF7-220ENST00000541963 STXBP2Q15833 593 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 TMEM240Q5SV17 173 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 ARHGEF16Q5VV41 709 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 BLOC1S2Q6QNY1 142 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 SLC39A5Q6ZMH5 540 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 KANSL1Q7Z3B3 1105 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 STK32CQ86UX6 486 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 SGMS1Q86VZ5 419 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 Q8N3U1 123 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 CPA6Q8N4T0 437 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 FANCBQ8NB91 859 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 MORC4Q8TE76 937 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 CUL5Q93034 780 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 RELTQ969Z4 430 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 HSPBAP1Q96EW2 488 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 HIST1H2AHQ96KK5 128 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 C8orf48Q96LL4 319 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 GLT1D1Q96MS3 346 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 PIGSQ96S52 555 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 RMDN3Q96TC7 470 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 HIST1H2AJQ99878 128 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 LBHD1Q9BQE6 289 aaPredicted RBP6.11□□□□□ -1.43
CPSF7-220ENST00000541963 C11orf84Q9BUA3 381 aaPredicted RBP6.11□□□□□ -1.43
CPSF7-220ENST00000541963 SGPP1Q9BX95 441 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 SPZ1Q9BXG8 430 aa6.11□□□□□ -1.43
CPSF7-220ENST00000541963 SEZ6LQ9BYH1 1024 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms