RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 ACCSQ96QU6 501 aa14.04□□□□□ -0.16
SCARB1-207ENST00000541661 EDEM2Q9BV94 578 aa14.04□□□□□ -0.16
SCARB1-207ENST00000541661 MRPL44Q9H9J2 332 aaKnown RBP14.04□□□□□ -0.16
SCARB1-207ENST00000541661 TRPC7Q9HCX4 862 aa14.04□□□□□ -0.16
SCARB1-207ENST00000541661 PTPRDP23468 1912 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 THADAQ6YHU6 1953 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 C4orf47A7E2U8 309 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 PROS1P07225 676 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 HDCP19113 662 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 PCSK1P29120 753 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 DGKEP52429 567 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 RBP5P82980 135 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 SOWAHAQ2M3V2 549 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 C8orf34Q49A92 452 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 LARP1BQ659C4 914 aaKnown RBP14.03□□□□□ -0.16
SCARB1-207ENST00000541661 PMS2CLQ68D20 193 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 PSAPL1Q6NUJ1 521 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 USP49Q70CQ1 688 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 RASSF3Q86WH2 238 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 SPATA2LQ8IUW3 424 aaPredicted RBP14.03□□□□□ -0.16
SCARB1-207ENST00000541661 CSGALNACT2Q8N6G5 542 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 KIAA1958Q8N8K9 716 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 SH3RF2Q8TEC5 729 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 USP33Q8TEY7 942 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 SAAL1Q96ER3 474 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 EPSTI1Q96J88 318 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 SPATA17Q96L03 361 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 LINC00597Q9H2U6 94 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 OLFML3Q9NRN5 406 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 RBAKQ9NYW8 714 aaPredicted RBP14.03□□□□□ -0.16
SCARB1-207ENST00000541661 STK17AQ9UEE5 414 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 SIX4Q9UIU6 781 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 ARHGAP26Q9UNA1 814 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 PCDHB13Q9Y5F0 798 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 SNX9Q9Y5X1 595 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 ABCA7Q8IZY2 2146 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 CEP295Q9C0D2 2601 aa14.03□□□□□ -0.16
SCARB1-207ENST00000541661 LNP1A1A4G5 178 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 C2orf78A6NCI8 922 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 MYMKA6NI61 221 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 K7EQS6 105 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 CD2BP2O95400 341 aaKnown RBP14.02□□□□□ -0.17
SCARB1-207ENST00000541661 NFATC1O95644 943 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 OPRD1P41143 372 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 PDE6CP51160 858 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 ZXDBP98169 803 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 PSMD2Q13200 908 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 ALCAMQ13740 583 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 CCDC142Q17RM4 750 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 USP39Q53GS9 565 aaKnown RBP14.02□□□□□ -0.17
SCARB1-207ENST00000541661 DAB2IPQ5VWQ8 1189 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 VSTM1Q6UX27 236 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 C4orf50Q6ZRC1 276 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 SCN4BQ8IWT1 228 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 ADGRF2Q8IZF7 708 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 TSTD1Q8NFU3 115 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 CCDC39Q9UFE4 941 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 WASF3Q9UPY6 502 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 SMC3Q9UQE7 1217 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 ASPMQ8IZT6 3477 aa14.02□□□□□ -0.17
SCARB1-207ENST00000541661 HCRTO43612 131 aa14.01□□□□□ -0.17
SCARB1-207ENST00000541661 KRT19P08727 400 aa14.01□□□□□ -0.17
SCARB1-207ENST00000541661 GBP1P32455 592 aa14.01□□□□□ -0.17
SCARB1-207ENST00000541661 NOVA1P51513 510 aaKnown RBP14.01□□□□□ -0.17
SCARB1-207ENST00000541661 KCNB1Q14721 858 aa14.01□□□□□ -0.17
SCARB1-207ENST00000541661 GAB4Q2WGN9 574 aa14.01□□□□□ -0.17
SCARB1-207ENST00000541661 SV2BQ7L1I2 683 aa14.01□□□□□ -0.17
SCARB1-207ENST00000541661 ADGRG2Q8IZP9 1017 aa14.01□□□□□ -0.17
SCARB1-207ENST00000541661 CNOT6LQ96LI5 555 aaKnown RBP14.01□□□□□ -0.17
SCARB1-207ENST00000541661 TTLL2Q9BWV7 592 aa14.01□□□□□ -0.17
SCARB1-207ENST00000541661 PDE11AQ9HCR9 933 aa14.01□□□□□ -0.17
SCARB1-207ENST00000541661 TBC1D7Q9P0N9 293 aa14.01□□□□□ -0.17
SCARB1-207ENST00000541661 MAGEC2Q9UBF1 373 aaPredicted RBP14.01□□□□□ -0.17
SCARB1-207ENST00000541661 CDH9Q9ULB4 789 aa14.01□□□□□ -0.17
SCARB1-207ENST00000541661 MMP17Q9ULZ9 603 aa14.01□□□□□ -0.17
SCARB1-207ENST00000541661 TNRC6BQ9UPQ9 1833 aaKnown RBP14□□□□□ -0.17
SCARB1-207ENST00000541661 FRMD3A2A2Y4 597 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 GOLGA8IPA6NC78 632 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 GOLGA8JA6NMD2 632 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 CDX4O14627 284 aaPredicted RBP14□□□□□ -0.17
SCARB1-207ENST00000541661 GIPC1O14908 333 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 KHNYNO15037 678 aaKnown RBP14□□□□□ -0.17
SCARB1-207ENST00000541661 ATP2C2O75185 946 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 GCNT3O95395 438 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 CEACAM1P13688 526 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 CSRP1P21291 193 aaKnown RBP14□□□□□ -0.17
SCARB1-207ENST00000541661 LMO2P25791 158 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 CASP5P51878 434 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 MRPS21P82921 87 aaKnown RBP14□□□□□ -0.17
SCARB1-207ENST00000541661 MYO1EQ12965 1108 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 MAPRE1Q15691 268 aaKnown RBP14□□□□□ -0.17
SCARB1-207ENST00000541661 CRY1Q16526 586 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 RRAGBQ5VZM2 374 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 SYCP3Q8IZU3 236 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 TTC16Q8NEE8 873 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 OLIG1Q8TAK6 271 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 KBTBD7Q8WVZ9 684 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 FAM84AQ96KN4 292 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 SYT15Q9BQS2 421 aa14□□□□□ -0.17
SCARB1-207ENST00000541661 CBWD1Q9BRT8 395 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms