RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 HCRTO43612 131 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 PRPF40AO75400 957 aaKnown RBP7.85□□□□□ -1.15
YBX3-209ENST00000540747 FAM13AO94988 1023 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 IL18RAPO95256 599 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 OLFM2O95897 454 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 CAPNS1P04632 268 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 USP17L7P0C7H9 530 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 PLCG1P19174 1290 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 SPINK2P20155 84 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 P2RY2P41231 377 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 PNPLA4P41247 253 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 MAGEA11P43364 429 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 RPL10AP62906 217 aaKnown RBP7.85□□□□□ -1.15
YBX3-209ENST00000540747 TSPY1Q01534 308 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 GRIN1Q05586 938 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 MESP2Q0VG99 397 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 TAF12Q16514 161 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 CRY1Q16526 586 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 DAB2IPQ5VWQ8 1189 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 ADALQ6DHV7 355 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 SLFN12LQ6IEE8 588 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 CC2D1AQ6P1N0 951 aaPredicted RBP7.85□□□□□ -1.15
YBX3-209ENST00000540747 FAM171BQ6P995 826 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 ZNF720Q7Z2F6 126 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 PIP4P1Q86T03 277 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 BRSK2Q8IWQ3 736 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 TMEM86AQ8N2M4 240 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 LRRC52Q8N7C0 313 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 ZSWIM2Q8NEG5 633 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 MDGA1Q8NFP4 955 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 TSTD1Q8NFU3 115 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 SH3RF2Q8TEC5 729 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 HVCN1Q96D96 273 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 FUBP3Q96I24 572 aaKnown RBP eCLIP7.85□□□□□ -1.15
YBX3-209ENST00000540747 CDK5RAP3Q96JB5 506 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 FAM84AQ96KN4 292 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 ZNF560Q96MR9 790 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 TTLL2Q9BWV7 592 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 BACH2Q9BYV9 841 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 LINC00597Q9H2U6 94 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 TMEM9BQ9NQ34 198 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 SIX4Q9UIU6 781 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 PLXND1Q9Y4D7 1925 aa7.85□□□□□ -1.15
YBX3-209ENST00000540747 ZNF638Q14966 1978 aaKnown RBP7.84□□□□□ -1.15
YBX3-209ENST00000540747 HELZP42694 1942 aaKnown RBP7.84□□□□□ -1.15
YBX3-209ENST00000540747 CELSR3Q9NYQ7 3312 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 A0A0A0MRY4 1105 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 TRAV19A0A0A6YYK7 116 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 FAM221BA6H8Z2 402 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 SRRM3A6NNA2 597 aaPredicted RBP7.84□□□□□ -1.15
YBX3-209ENST00000540747 UPK3BL1B0FP48 263 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 UPK3BL2E5RIL1 263 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 KHNYNO15037 678 aaKnown RBP7.84□□□□□ -1.15
YBX3-209ENST00000540747 CYP17A1P05093 508 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 CKMP06732 381 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 PFKLP17858 780 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 ACAT1P24752 427 aaKnown RBP7.84□□□□□ -1.15
YBX3-209ENST00000540747 POLR2BP30876 1174 aaKnown RBP7.84□□□□□ -1.15
YBX3-209ENST00000540747 IFNAR2P48551 515 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 DGKEP52429 567 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 IRX4P78413 519 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 KCNA1Q09470 495 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 FOXC1Q12948 553 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 COL9A2Q14055 689 aaPredicted RBP7.84□□□□□ -1.15
YBX3-209ENST00000540747 SOWAHAQ2M3V2 549 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 USP39Q53GS9 565 aaKnown RBP7.84□□□□□ -1.15
YBX3-209ENST00000540747 TMEM92Q6UXU6 159 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 CYP2U1Q7Z449 544 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 SFR1Q86XK3 245 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 SFTPA1Q8IWL2 248 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 PHTF2Q8N3S3 785 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 TOP6BLQ8N6T0 577 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 ARL14EPQ8N8R7 260 aaPredicted RBP7.84□□□□□ -1.15
YBX3-209ENST00000540747 CCDC26Q8TAB7 109 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 KBTBD7Q8WVZ9 684 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 EXOC4Q96A65 974 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 SPATA17Q96L03 361 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 CEP295NLQ96MC4 621 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 FNBP1Q96RU3 617 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 SCNM1Q9BWG6 230 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 TPSD1Q9BZJ3 242 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 DDX43Q9NXZ2 648 aaKnown RBP7.84□□□□□ -1.15
YBX3-209ENST00000540747 MBD1Q9UIS9 605 aaPredicted RBP7.84□□□□□ -1.15
YBX3-209ENST00000540747 GTF3C4Q9UKN8 822 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 MAGED2Q9UNF1 606 aaPredicted RBP7.84□□□□□ -1.15
YBX3-209ENST00000540747 INVSQ9Y283 1065 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 NEUROG3Q9Y4Z2 214 aa7.84□□□□□ -1.15
YBX3-209ENST00000540747 FLNBO75369 2602 aaKnown RBP7.84□□□□□ -1.15
YBX3-209ENST00000540747 TCHHQ07283 1943 aa7.84□□□□□ -1.16
YBX3-209ENST00000540747 ACACAQ13085 2346 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 THADAQ6YHU6 1953 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 PCDH15Q96QU1 1955 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 LEFTY2O00292 366 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 TNFRSF10BO14763 440 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 EIF5BO60841 1220 aaKnown RBP7.83□□□□□ -1.16
YBX3-209ENST00000540747 ADAM23O75077 832 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 TBCAO75347 108 aaKnown RBP7.83□□□□□ -1.16
YBX3-209ENST00000540747 NFATC1O95644 943 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 ITGB3P05106 788 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 GBP1P32455 592 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms