RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 ACAD11Q709F0 780 aa14.83□□□□□ -0.04
COLCA1-204ENST00000540738 CCNYL1Q8N7R7 359 aa14.83□□□□□ -0.04
COLCA1-204ENST00000540738 CNPY3Q9BT09 278 aa14.83□□□□□ -0.04
COLCA1-204ENST00000540738 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.83□□□□□ -0.04
COLCA1-204ENST00000540738 ASAH2Q9NR71 780 aa14.83□□□□□ -0.04
COLCA1-204ENST00000540738 MEIS2O14770 477 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 CST8O60676 142 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 SYF2O95926 243 aaKnown RBP14.82□□□□□ -0.04
COLCA1-204ENST00000540738 TBX4P57082 545 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 PTK6Q13882 451 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 TTLL9Q3SXZ7 439 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 SLC39A12Q504Y0 691 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 EPC2Q52LR7 807 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 AARS2Q5JTZ9 985 aaKnown RBP14.82□□□□□ -0.04
COLCA1-204ENST00000540738 TFB1MQ8WVM0 346 aaKnown RBP14.82□□□□□ -0.04
COLCA1-204ENST00000540738 SENP8Q96LD8 212 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 EFHD1Q9BUP0 239 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 FOXP3Q9BZS1 431 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 ST3GAL5Q9UNP4 418 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 PON1P27169 355 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 MLH1P40692 756 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 HADHAP40939 763 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 CASP4P49662 377 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 FASTKD1Q53R41 847 aaKnown RBP14.82□□□□□ -0.04
COLCA1-204ENST00000540738 DDX42Q86XP3 938 aaKnown RBP eCLIP14.82□□□□□ -0.04
COLCA1-204ENST00000540738 PRR23AA6NEV1 266 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 PRPF4O43172 522 aaKnown RBP eCLIP14.82□□□□□ -0.04
COLCA1-204ENST00000540738 NCK2O43639 380 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 RBP3P10745 1247 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 CD52P31358 61 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 BYSLQ13895 437 aaKnown RBP14.82□□□□□ -0.04
COLCA1-204ENST00000540738 RCN2Q14257 317 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 CFAP61Q8NHU2 1237 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 MON2Q7Z3U7 1717 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 RASA4BC9J798 803 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 RASA4O43374 803 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 PAEPP09466 180 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 GRIK3Q13003 919 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 TAF11Q15544 211 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 CENPPQ6IPU0 288 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 MRPS23Q9Y3D9 190 aaKnown RBP14.82□□□□□ -0.04
COLCA1-204ENST00000540738 EML1O00423 815 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 GNGT2O14610 69 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 MMP3P08254 477 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 GZMAP12544 262 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 ORC1Q13415 861 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 ART3Q13508 389 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.82□□□□□ -0.04
COLCA1-204ENST00000540738 TTC17Q96AE7 1141 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 CYTH2Q99418 400 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 TRAIPQ9BWF2 469 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 KCNMB3Q9NPA1 279 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 AGPAT5Q9NUQ2 364 aa14.82□□□□□ -0.04
COLCA1-204ENST00000540738 XRN1Q8IZH2 1706 aaKnown RBP14.81□□□□□ -0.04
COLCA1-204ENST00000540738 CYP11B1P15538 503 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 RAP1GAPP47736 663 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 NDST1P52848 882 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 CCDC197Q8NCU1 140 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 RAB23Q9ULC3 237 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 PCDHGB4Q9UN71 923 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 PHF20L1A8MW92 1017 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 FOXN3O00409 490 aaPredicted RBP14.81□□□□□ -0.04
COLCA1-204ENST00000540738 PSTPIP1O43586 416 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 FDFT1P37268 417 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 CENPCQ03188 943 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 C7orf61Q8IZ16 206 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 SLC25A41Q8N5S1 370 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 FBXO22Q8NEZ5 403 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 PGLYRP2Q96PD5 576 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 NOVA2Q9UNW9 492 aaKnown RBP14.81□□□□□ -0.04
COLCA1-204ENST00000540738 AAR2Q9Y312 384 aaKnown RBP14.81□□□□□ -0.04
COLCA1-204ENST00000540738 ARHGAP10A1A4S6 786 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 SPAG6O75602 509 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 GFAPP14136 432 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 PMS2P54278 862 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 ZKSCAN8Q15776 578 aaPredicted RBP14.81□□□□□ -0.04
COLCA1-204ENST00000540738 UNC93AQ86WB7 457 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 HELQQ8TDG4 1101 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 C12orf42Q96LP6 360 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 TRAF3IP3Q9Y228 551 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 ANP32DO95626 131 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 ASGR1P07306 291 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 CSH1P0DML2 217 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 CSH2P0DML3 217 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 COMTP21964 271 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 MAP2K2P36507 400 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 KCNA10Q16322 511 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 MAML3Q96JK9 1138 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 SCUBE2Q9NQ36 999 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 EVA1BQ9NVM1 165 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 ORC6Q9Y5N6 252 aa14.81□□□□□ -0.04
COLCA1-204ENST00000540738 TRAV19A0A0A6YYK7 116 aa14.8□□□□□ -0.04
COLCA1-204ENST00000540738 PHF2O75151 1096 aa14.8□□□□□ -0.04
COLCA1-204ENST00000540738 ALDH1A2O94788 518 aa14.8□□□□□ -0.04
COLCA1-204ENST00000540738 STIP1P31948 543 aaKnown RBP14.8□□□□□ -0.04
COLCA1-204ENST00000540738 ZRANB3Q5FWF4 1079 aa14.8□□□□□ -0.04
COLCA1-204ENST00000540738 PALB2Q86YC2 1186 aa14.8□□□□□ -0.04
COLCA1-204ENST00000540738 FAM172AQ8WUF8 416 aa14.8□□□□□ -0.04
COLCA1-204ENST00000540738 INPP4AQ96PE3 977 aaPredicted RBP14.8□□□□□ -0.04
COLCA1-204ENST00000540738 KDM4CQ9H3R0 1056 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms