RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 ADAMTS5Q9UNA0 930 aa4.56□□□□□ -1.68
MDM2-227ENST00000540709 A0A088AWK7 358 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 E2F8A0AVK6 867 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 H3BML4 177 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 BTN3A1O00481 513 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 THP07101 528 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 NPSP0C0P6 89 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 PRR35P0CG20 571 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 LRPAP1P30533 357 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 CYP4F2P78329 520 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 MYO1EQ12965 1108 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 CTBP1Q13363 440 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 LY6KQ17RY6 165 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 L1TD1Q5T7N2 865 aaKnown RBP4.55□□□□□ -1.68
MDM2-227ENST00000540709 COL23A1Q86Y22 540 aaPredicted RBP4.55□□□□□ -1.68
MDM2-227ENST00000540709 OR6B3Q8NGW1 331 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 TMEM171Q8WVE6 324 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 PPP2R3CQ969Q6 453 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 CXorf36Q9H7Y0 433 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 ZMAT3Q9HA38 289 aaKnown RBP4.55□□□□□ -1.68
MDM2-227ENST00000540709 ANLNQ9NQW6 1124 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 TYW1Q9NV66 732 aaKnown RBP4.55□□□□□ -1.68
MDM2-227ENST00000540709 GABBR1Q9UBS5 961 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 TBC1D30Q9Y2I9 924 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 MED16Q9Y2X0 877 aa4.55□□□□□ -1.68
MDM2-227ENST00000540709 TMEM233B4DJY2 109 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 AP4M1O00189 453 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 ZNF213O14771 459 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 MARCH6O60337 910 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 CYP2C9P11712 490 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 XRCC6P12956 609 aaKnown RBP eCLIP4.54□□□□□ -1.68
MDM2-227ENST00000540709 NPR1P16066 1061 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 KELP23276 732 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 EPHB2P29323 1055 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 SLC7A1P30825 629 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 PDE6CP51160 858 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 TPTEP56180 551 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 TUBA4AP68366 448 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 HOXA4Q00056 320 aaPredicted RBP4.54□□□□□ -1.68
MDM2-227ENST00000540709 SLC13A2Q13183 592 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 ZIK1Q3SY52 487 aaPredicted RBP4.54□□□□□ -1.68
MDM2-227ENST00000540709 PLA1AQ53H76 456 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 CEP78Q5JTW2 689 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 ZNF626Q68DY1 528 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 SERPINA13PQ6UXR4 307 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 DPY19L3Q6ZPD9 716 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 YTHDF3Q7Z739 585 aaKnown RBP4.54□□□□□ -1.68
MDM2-227ENST00000540709 CNGA4Q8IV77 575 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 ABHD11Q8NFV4 315 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 CYP2W1Q8TAV3 490 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 REPS1Q96D71 796 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 QTRT1Q9BXR0 403 aaKnown RBP4.54□□□□□ -1.68
MDM2-227ENST00000540709 NRIP3Q9NQ35 241 aa4.54□□□□□ -1.68
MDM2-227ENST00000540709 INO80B-WBP1J3KQ70 363 aa4.53□□□□□ -1.68
MDM2-227ENST00000540709 ATXN1P54253 815 aaKnown RBP4.53□□□□□ -1.68
MDM2-227ENST00000540709 EPHB1P54762 984 aa4.53□□□□□ -1.68
MDM2-227ENST00000540709 HNRNPA0Q13151 305 aaKnown RBP4.53□□□□□ -1.68
MDM2-227ENST00000540709 MLC1Q15049 377 aa4.53□□□□□ -1.68
MDM2-227ENST00000540709 PROSER3Q2NL68 480 aa4.53□□□□□ -1.68
MDM2-227ENST00000540709 TBC1D25Q3MII6 688 aa4.53□□□□□ -1.68
MDM2-227ENST00000540709 ODR4Q5SWX8 454 aa4.53□□□□□ -1.68
MDM2-227ENST00000540709 NPNTQ6UXI9 565 aa4.53□□□□□ -1.68
MDM2-227ENST00000540709 ZNF66Q6ZN08 573 aa4.53□□□□□ -1.68
MDM2-227ENST00000540709 Q6ZWC4 215 aa4.53□□□□□ -1.68
MDM2-227ENST00000540709 EPM2AIP1Q7L775 607 aaPredicted RBP4.53□□□□□ -1.68
MDM2-227ENST00000540709 CAND1Q86VP6 1230 aaKnown RBP4.53□□□□□ -1.68
MDM2-227ENST00000540709 GLCCI1Q86VQ1 547 aa4.53□□□□□ -1.68
MDM2-227ENST00000540709 BPIFB1Q8TDL5 484 aa4.53□□□□□ -1.68
MDM2-227ENST00000540709 DAZAP1Q96EP5 407 aaKnown RBP4.53□□□□□ -1.68
MDM2-227ENST00000540709 AIFM3Q96NN9 605 aa4.53□□□□□ -1.68
MDM2-227ENST00000540709 TAAR9Q96RI9 348 aa4.53□□□□□ -1.68
MDM2-227ENST00000540709 INO80BQ9C086 356 aaPredicted RBP4.53□□□□□ -1.68
MDM2-227ENST00000540709 GBA2Q9HCG7 927 aaPredicted RBP4.53□□□□□ -1.68
MDM2-227ENST00000540709 SACM1LQ9NTJ5 587 aa4.53□□□□□ -1.68
MDM2-227ENST00000540709 TRMT13Q9NUP7 481 aaKnown RBP4.53□□□□□ -1.68
MDM2-227ENST00000540709 FLRT1Q9NZU1 646 aa4.53□□□□□ -1.68
MDM2-227ENST00000540709 SH2B3Q9UQQ2 575 aa4.53□□□□□ -1.68
MDM2-227ENST00000540709 CFAP69A5D8W1 941 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 TISP43B9A030 160 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 PRRT4C9JH25 899 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 PSMD9O00233 223 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 RGS10O43665 173 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 CSF1RP07333 972 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 DLDP09622 509 aaKnown RBP4.52□□□□□ -1.69
MDM2-227ENST00000540709 ZKSCAN1P17029 563 aaPredicted RBP4.52□□□□□ -1.69
MDM2-227ENST00000540709 ALDH5A1P51649 535 aaPredicted RBP4.52□□□□□ -1.69
MDM2-227ENST00000540709 DGKEP52429 567 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 ITGA8P53708 1063 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 E2F1Q01094 437 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 RAB32Q13637 225 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 GTF2H3Q13889 308 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 PTCHD3Q3KNS1 767 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 ANO6Q4KMQ2 910 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 SLC44A4Q53GD3 710 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 SLC9A4Q6AI14 798 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 SLC18B1Q6NT16 456 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 MIS18BP1Q6P0N0 1132 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 SLC2A7Q6PXP3 512 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 B3GNT9Q6UX72 402 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 TRIM72Q6ZMU5 477 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms