RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 SUSD3Q96L08 255 aa8.11□□□□□ -1.11
GNE-205ENST00000539815 CDT1Q9H211 546 aa8.11□□□□□ -1.11
GNE-205ENST00000539815 AASDHPPTQ9NRN7 309 aa8.11□□□□□ -1.11
GNE-205ENST00000539815 GOLGA6L22H0YM25 854 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 RBAK-RBAKDNI3L0D1 243 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 SLITRK3O94933 977 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 CXCL8P10145 99 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 HOXA11P31270 313 aaPredicted RBP8.1□□□□□ -1.11
GNE-205ENST00000539815 AMPD3Q01432 767 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 DUOXA1Q1HG43 343 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 SEZ6Q53EL9 994 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 SYT12Q8IV01 421 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 HNRNPLLQ8WVV9 542 aaKnown RBP8.1□□□□□ -1.11
GNE-205ENST00000539815 BHMTQ93088 406 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 FBXO32Q969P5 355 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 PDZD7Q9H5P4 517 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 PARVGQ9HBI0 331 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 PLA2G4CQ9UP65 541 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 EVPLQ92817 2033 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 FRMPD3Q5JV73 1810 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 IGF2RP11717 2491 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 IGKV6-21A0A0C4DH24 114 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 SMAPO00193 183 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 ADAM12O43184 909 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 CTIFO43310 598 aaKnown RBP8.1□□□□□ -1.11
GNE-205ENST00000539815 HRO43593 1189 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 HYAL3O43820 417 aaPredicted RBP8.1□□□□□ -1.11
GNE-205ENST00000539815 GCNT3O95395 438 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 KLF8O95600 359 aaPredicted RBP8.1□□□□□ -1.11
GNE-205ENST00000539815 HOXB2P14652 356 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 RPA1P27694 616 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 ABCG1P45844 678 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 RBP5P82980 135 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 SEMG2Q02383 582 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 GPR17Q13304 367 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 LILRA6Q6PI73 481 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 RLN3Q8WXF3 142 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 ERLEC1Q96DZ1 483 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 LRIG1Q96JA1 1093 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 PNKPQ96T60 521 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 DDX23Q9BUQ8 820 aaKnown RBP8.1□□□□□ -1.11
GNE-205ENST00000539815 PLEKHA5Q9HAU0 1116 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 WNT6Q9Y6F9 365 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 HTTP42858 3142 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 SPAARA0A1B0GVQ0 90 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 F8W810 466 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 ZNF217O75362 1048 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 NFICP08651 508 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 AMHR2Q16671 573 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 UBXN11Q5T124 520 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 MIEF2Q96C03 454 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 PAAF1Q9BRP4 392 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 ZMYM2Q9UBW7 1377 aa8.1□□□□□ -1.11
GNE-205ENST00000539815 ZBTB39O15060 712 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 CCP110O43303 1012 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 AKAP3O75969 853 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 FGFR3P22607 806 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 IRX1P78414 480 aaPredicted RBP8.09□□□□□ -1.11
GNE-205ENST00000539815 EXOSC10Q01780 885 aaKnown RBP8.09□□□□□ -1.11
GNE-205ENST00000539815 TNK2Q07912 1038 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 GRAMD4Q6IC98 578 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 WDR5BQ86VZ2 330 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 CHCHD4Q8N4Q1 142 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 SH3RF2Q8TEC5 729 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 KCNB2Q92953 911 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 CLDN23Q96B33 292 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 NXF1Q9UBU9 619 aaKnown RBP8.09□□□□□ -1.11
GNE-205ENST00000539815 AGO2Q9UKV8 859 aaKnown RBP8.09□□□□□ -1.11
GNE-205ENST00000539815 CYP3A7-CYP3A51PA0A087WV96 503 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 CCDC163A0A0D9SF12 145 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 ZBTB42B2RXF5 422 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 RALAP11233 206 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 TYMPP19971 482 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 CYP3A7P24462 503 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 NPTX2P47972 431 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 LHX1P48742 406 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 GAD2Q05329 585 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 C10orf76Q5T2E6 689 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 TCEAL6Q6IPX3 200 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 C16orf87Q6PH81 154 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 FOXR1Q6PIV2 292 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 CCDC65Q8IXS2 484 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 DAGLBQ8NCG7 672 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 C2orf15Q8WU43 125 aaKnown RBP8.09□□□□□ -1.11
GNE-205ENST00000539815 TCEAL3Q969E4 200 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 MTMR9Q96QG7 549 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 CDC6Q99741 560 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 POLR3CQ9BUI4 534 aaPredicted RBP8.09□□□□□ -1.11
GNE-205ENST00000539815 AHCTF1Q8WYP5 2266 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 TCRBV21S2A2A0A5A6 115 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 GOLGA6L4A6NEF3 574 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 STX6O43752 255 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 N4BP1O75113 896 aaKnown RBP8.09□□□□□ -1.11
GNE-205ENST00000539815 ARL2P36404 184 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 CCNHP51946 323 aaPredicted RBP8.09□□□□□ -1.11
GNE-205ENST00000539815 SGO2Q562F6 1265 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 TXNDC8Q6A555 127 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 VITQ6UXI7 678 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 DENND5BQ6ZUT9 1274 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 CMTM8Q8IZV2 173 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms