RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 SLC25A11Q02978 314 aaKnown RBP13.88□□□□□ -0.19
UBE3B-209ENST00000539584 PRKD1Q15139 912 aaPredicted RBP13.88□□□□□ -0.19
UBE3B-209ENST00000539584 CCDC6Q16204 474 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 NBPF20Q3BBV1 942 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 LGSNQ5TDP6 509 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 ANKMY2Q8IV38 441 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 RAB3IL1Q8TBN0 382 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 KCNV2Q8TDN2 545 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 SLC44A1Q8WWI5 657 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 ZBED3Q96IU2 234 aaPredicted RBP13.88□□□□□ -0.19
UBE3B-209ENST00000539584 NIFKQ9BYG3 293 aaKnown RBP13.88□□□□□ -0.19
UBE3B-209ENST00000539584 HEY2Q9UBP5 337 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 F8W8V4 182 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 MCF2LO15068 1137 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 CST8O60676 142 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 INHBAP08476 426 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 GSTA2P09210 222 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 KRT3P12035 628 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 TCF4P15884 667 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 PSMA2P25787 234 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 NEK3P51956 506 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 EFNA5P52803 228 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 TGFB2P61812 414 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 ZNF200P98182 395 aaPredicted RBP13.88□□□□□ -0.19
UBE3B-209ENST00000539584 OGDHQ02218 1023 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 ZBTB16Q05516 673 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 TBCCQ15814 346 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 DUOXA2Q1HG44 320 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 MTERF2Q49AM1 385 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 FNBP1LQ5T0N5 605 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 GPAT2Q6NUI2 795 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 CDAN1Q8IWY9 1227 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 VPS52Q8N1B4 723 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 PPFIBP2Q8ND30 876 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 MCUR1Q96AQ8 359 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 ZNF333Q96JL9 665 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 HAPLN2Q9GZV7 340 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 CISHQ9NSE2 258 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.88□□□□□ -0.19
UBE3B-209ENST00000539584 STX18Q9P2W9 335 aaKnown RBP13.88□□□□□ -0.19
UBE3B-209ENST00000539584 ZNF212Q9UDV6 495 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 XPO7Q9UIA9 1087 aaKnown RBP13.88□□□□□ -0.19
UBE3B-209ENST00000539584 ZNF180Q9UJW8 692 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 LRRIQ4A6NIV6 560 aa13.87□□□□□ -0.19
UBE3B-209ENST00000539584 AHCYL1O43865 530 aa13.87□□□□□ -0.19
UBE3B-209ENST00000539584 MAGEC1O60732 1142 aa13.87□□□□□ -0.19
UBE3B-209ENST00000539584 ENTPD5O75356 428 aa13.87□□□□□ -0.19
UBE3B-209ENST00000539584 OATP04181 439 aa13.87□□□□□ -0.19
UBE3B-209ENST00000539584 FESP07332 822 aa13.87□□□□□ -0.19
UBE3B-209ENST00000539584 DLDP09622 509 aaKnown RBP13.87□□□□□ -0.19
UBE3B-209ENST00000539584 ATP4AP20648 1035 aa13.87□□□□□ -0.19
UBE3B-209ENST00000539584 SLC34A1Q06495 639 aa13.87□□□□□ -0.19
UBE3B-209ENST00000539584 TNFAIP1Q13829 316 aa13.87□□□□□ -0.19
UBE3B-209ENST00000539584 HP1BP3Q5SSJ5 553 aaPredicted RBP13.87□□□□□ -0.19
UBE3B-209ENST00000539584 CAPN12Q6ZSI9 719 aa13.87□□□□□ -0.19
UBE3B-209ENST00000539584 CMASQ8NFW8 434 aaPredicted RBP13.87□□□□□ -0.19
UBE3B-209ENST00000539584 OR5B17Q8NGF7 314 aa13.87□□□□□ -0.19
UBE3B-209ENST00000539584 MIPEPQ99797 713 aa13.87□□□□□ -0.19
UBE3B-209ENST00000539584 TARS2Q9BW92 718 aaKnown RBP13.87□□□□□ -0.19
UBE3B-209ENST00000539584 RSAD1Q9HA92 442 aa13.87□□□□□ -0.19
UBE3B-209ENST00000539584 KCNK4Q9NYG8 393 aa13.87□□□□□ -0.19
UBE3B-209ENST00000539584 KANSL3Q9P2N6 904 aa13.87□□□□□ -0.19
UBE3B-209ENST00000539584 ZNF219Q9P2Y4 722 aaPredicted RBP13.87□□□□□ -0.19
UBE3B-209ENST00000539584 DNAJB4Q9UDY4 337 aa13.87□□□□□ -0.19
UBE3B-209ENST00000539584 FBXO40Q9UH90 709 aa13.87□□□□□ -0.19
UBE3B-209ENST00000539584 A0A0G2JND7 137 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 CFAP69A5D8W1 941 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 TRDMT1O14717 391 aaKnown RBP13.86□□□□□ -0.19
UBE3B-209ENST00000539584 CHADO15335 359 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 LRCH4O75427 683 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 ECM2O94769 699 aaPredicted RBP13.86□□□□□ -0.19
UBE3B-209ENST00000539584 ESRRAP11474 423 aaPredicted RBP13.86□□□□□ -0.19
UBE3B-209ENST00000539584 NEFHP12036 1026 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 RAP1GDS1P52306 607 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 PTK7Q13308 1070 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 ATG16L1Q676U5 607 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 TRIM68Q6AZZ1 485 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 SH2D5Q6ZV89 423 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 WDTC1Q8N5D0 677 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 STMN2Q93045 179 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 C7orf26Q96N11 449 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 RPAP3Q9H6T3 665 aaPredicted RBP13.86□□□□□ -0.19
UBE3B-209ENST00000539584 ZNF302Q9NR11 478 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 MKS1Q9NXB0 559 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 CNTN3Q9P232 1028 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 DCTN4Q9UJW0 460 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 SIP14410 1827 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 GOLGA8SH3BPF8 625 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 GOLGA8MH3BSY2 632 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 ADCY3O60266 1144 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 TOM1L1O75674 476 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 KRT37O76014 449 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 RGS20O76081 388 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 LINGO3P0C6S8 592 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 ICAM3P32942 547 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 DPYSL3Q14195 570 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 DBN1Q16643 649 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 MSS51Q4VC12 460 aa13.86□□□□□ -0.19
UBE3B-209ENST00000539584 KHDC1Q4VXA5 237 aaKnown RBP13.86□□□□□ -0.19
UBE3B-209ENST00000539584 FAM47CQ5HY64 1035 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms