RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 ZMIZ2Q8NF64 920 aa16.75■□□□□ 0.27
RPAIN-206ENST00000539417 RPP25Q9BUL9 199 aaKnown RBP16.75■□□□□ 0.27
RPAIN-206ENST00000539417 NT5C1AQ9BXI3 368 aa16.75■□□□□ 0.27
RPAIN-206ENST00000539417 SIX2Q9NPC8 291 aa16.75■□□□□ 0.27
RPAIN-206ENST00000539417 AVENQ9NQS1 362 aaPredicted RBP16.75■□□□□ 0.27
RPAIN-206ENST00000539417 ASAH2Q9NR71 780 aa16.75■□□□□ 0.27
RPAIN-206ENST00000539417 MUTYHQ9UIF7 546 aa16.75■□□□□ 0.27
RPAIN-206ENST00000539417 NR2E1Q9Y466 385 aa16.75■□□□□ 0.27
RPAIN-206ENST00000539417 LAMP2P13473 410 aa16.74■□□□□ 0.27
RPAIN-206ENST00000539417 ADORA2BP29275 332 aa16.74■□□□□ 0.27
RPAIN-206ENST00000539417 GRIK1P39086 918 aa16.74■□□□□ 0.27
RPAIN-206ENST00000539417 KCNMA1Q12791 1236 aa16.74■□□□□ 0.27
RPAIN-206ENST00000539417 TEAD2Q15562 447 aa16.74■□□□□ 0.27
RPAIN-206ENST00000539417 TRIM65Q6PJ69 517 aa16.74■□□□□ 0.27
RPAIN-206ENST00000539417 OTOP3Q7RTS5 596 aa16.74■□□□□ 0.27
RPAIN-206ENST00000539417 FAXDC2Q96IV6 333 aa16.74■□□□□ 0.27
RPAIN-206ENST00000539417 TNIP3Q96KP6 325 aa16.74■□□□□ 0.27
RPAIN-206ENST00000539417 SMOQ99835 787 aa16.74■□□□□ 0.27
RPAIN-206ENST00000539417 MED10Q9BTT4 135 aa16.74■□□□□ 0.27
RPAIN-206ENST00000539417 VPS16Q9H269 839 aa16.74■□□□□ 0.27
RPAIN-206ENST00000539417 NDST4Q9H3R1 872 aa16.74■□□□□ 0.27
RPAIN-206ENST00000539417 EPS15L1Q9UBC2 864 aa16.74■□□□□ 0.27
RPAIN-206ENST00000539417 CDH7Q9ULB5 785 aa16.74■□□□□ 0.27
RPAIN-206ENST00000539417 MAGED2Q9UNF1 606 aaPredicted RBP16.74■□□□□ 0.27
RPAIN-206ENST00000539417 ASB3Q9Y575 518 aa16.74■□□□□ 0.27
RPAIN-206ENST00000539417 TNFRSF10AO00220 468 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 TADA3O75528 432 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 ATP1A3P13637 1013 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 ZNF18P17022 549 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 PTMSP20962 102 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 PON1P27169 355 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 GABRR2P28476 465 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 CYP4F8P98187 520 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 PPP1R26Q5T8A7 1209 aaPredicted RBP16.73■□□□□ 0.27
RPAIN-206ENST00000539417 CYP4A22Q5TCH4 519 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 APTXQ7Z2E3 356 aaKnown RBP16.73■□□□□ 0.27
RPAIN-206ENST00000539417 GPIHBP1Q8IV16 184 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 ACSF2Q96CM8 615 aaPredicted RBP16.73■□□□□ 0.27
RPAIN-206ENST00000539417 CYFIP2Q96F07 1278 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 TMEM176AQ96HP8 235 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 ZSWIM1Q9BR11 485 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 MYO10Q9HD67 2058 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 OBSL1O75147 1896 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 NCANO14594 1321 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 NOL4O94818 638 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 F11P03951 625 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 EEF1GP26641 437 aaKnown RBP16.73■□□□□ 0.27
RPAIN-206ENST00000539417 RPL10AP62906 217 aaKnown RBP16.73■□□□□ 0.27
RPAIN-206ENST00000539417 CETN1Q12798 172 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 VEPH1Q14D04 833 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 IQCB1Q15051 598 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 PARM1Q6UWI2 310 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 VSTM1Q6UX27 236 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 GBP6Q6ZN66 633 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 FGF14Q92915 247 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 HEXIM2Q96MH2 286 aaKnown RBP16.73■□□□□ 0.27
RPAIN-206ENST00000539417 UBE2TQ9NPD8 197 aaPredicted RBP16.73■□□□□ 0.27
RPAIN-206ENST00000539417 KRT82Q9NSB4 513 aa16.73■□□□□ 0.27
RPAIN-206ENST00000539417 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.73■□□□□ 0.27
RPAIN-206ENST00000539417 NCOR1O75376 2440 aa16.72■□□□□ 0.27
RPAIN-206ENST00000539417 AP1G2O75843 785 aa16.72■□□□□ 0.27
RPAIN-206ENST00000539417 KLK7P49862 253 aa16.72■□□□□ 0.27
RPAIN-206ENST00000539417 EXOC3L4Q17RC7 722 aa16.72■□□□□ 0.27
RPAIN-206ENST00000539417 GPRIN1Q7Z2K8 1008 aa16.72■□□□□ 0.27
RPAIN-206ENST00000539417 ITIH5Q86UX2 942 aa16.72■□□□□ 0.27
RPAIN-206ENST00000539417 TFAP2BQ92481 460 aa16.72■□□□□ 0.27
RPAIN-206ENST00000539417 SPATA17Q96L03 361 aa16.72■□□□□ 0.27
RPAIN-206ENST00000539417 C8orf48Q96LL4 319 aa16.72■□□□□ 0.27
RPAIN-206ENST00000539417 HNRNPABQ99729 332 aaKnown RBP16.72■□□□□ 0.27
RPAIN-206ENST00000539417 BPIFA3Q9BQP9 254 aa16.72■□□□□ 0.27
RPAIN-206ENST00000539417 PLA2G2FQ9BZM2 168 aa16.72■□□□□ 0.27
RPAIN-206ENST00000539417 ATXN3LQ9H3M9 355 aa16.72■□□□□ 0.27
RPAIN-206ENST00000539417 EPHX3Q9H6B9 360 aa16.72■□□□□ 0.27
RPAIN-206ENST00000539417 KCNK12Q9HB15 430 aa16.72■□□□□ 0.27
RPAIN-206ENST00000539417 LIMA1Q9UHB6 759 aaKnown RBP16.72■□□□□ 0.27
RPAIN-206ENST00000539417 PCDHB4Q9Y5E5 795 aa16.72■□□□□ 0.27
RPAIN-206ENST00000539417 GTPBP10A4D1E9 387 aaKnown RBP16.71■□□□□ 0.27
RPAIN-206ENST00000539417 ANHXE9PGG2 379 aa16.71■□□□□ 0.27
RPAIN-206ENST00000539417 PES1O00541 588 aaKnown RBP16.71■□□□□ 0.27
RPAIN-206ENST00000539417 ZNF197O14709 1029 aa16.71■□□□□ 0.27
RPAIN-206ENST00000539417 TNFRSF10BO14763 440 aa16.71■□□□□ 0.27
RPAIN-206ENST00000539417 CSH1P0DML2 217 aa16.71■□□□□ 0.27
RPAIN-206ENST00000539417 CSH2P0DML3 217 aa16.71■□□□□ 0.27
RPAIN-206ENST00000539417 FCARP24071 287 aa16.71■□□□□ 0.27
RPAIN-206ENST00000539417 TBXAS1P24557 533 aaPredicted RBP16.71■□□□□ 0.27
RPAIN-206ENST00000539417 ZNF165P49910 485 aa16.71■□□□□ 0.27
RPAIN-206ENST00000539417 COPB1P53618 953 aaKnown RBP16.71■□□□□ 0.27
RPAIN-206ENST00000539417 MAP3K7CLP57077 242 aa16.71■□□□□ 0.27
RPAIN-206ENST00000539417 HTR4Q13639 388 aa16.71■□□□□ 0.27
RPAIN-206ENST00000539417 TMEM270Q6UE05 265 aa16.71■□□□□ 0.27
RPAIN-206ENST00000539417 CLEC20AQ6ZU45 233 aa16.71■□□□□ 0.27
RPAIN-206ENST00000539417 PLCD3Q8N3E9 789 aa16.71■□□□□ 0.27
RPAIN-206ENST00000539417 SCAMP5Q8TAC9 235 aa16.71■□□□□ 0.27
RPAIN-206ENST00000539417 JAKMIP2Q96AA8 810 aa16.71■□□□□ 0.27
RPAIN-206ENST00000539417 SMARCD1Q96GM5 515 aa16.71■□□□□ 0.27
RPAIN-206ENST00000539417 ACP6Q9NPH0 428 aa16.71■□□□□ 0.27
RPAIN-206ENST00000539417 NUMBLQ9Y6R0 609 aa16.71■□□□□ 0.27
RPAIN-206ENST00000539417 DENND4CQ5VZ89 1909 aa16.71■□□□□ 0.26
RPAIN-206ENST00000539417 CUL9Q8IWT3 2517 aa16.7■□□□□ 0.26
RPAIN-206ENST00000539417 BECN2A8MW95 431 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms