RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 FSBPO95073 299 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 POMCP01189 267 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 CALB1P05937 261 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 FAM163BP0C2L3 166 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 FGFR1P11362 822 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 RRM1P23921 792 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 CTNNA2P26232 953 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 TNFRSF8P28908 595 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 CXCR5P32302 372 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 GGCXP38435 758 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 CCT5P48643 541 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 GRIK3Q13003 919 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 CNGA2Q16280 664 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 ZNF394Q53GI3 561 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 UNC93AQ86WB7 457 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 PASD1Q8IV76 773 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 WDTC1Q8N5D0 677 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 ACTRT1Q8TDG2 376 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 AENQ8WTP8 325 aaKnown RBP9.34□□□□□ -0.91
DDB1-213ENST00000539332 CABS1Q96KC9 395 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 RUFY1Q96T51 708 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 SH3GL2Q99962 352 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 CARD9Q9H257 536 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 DONSONQ9NYP3 566 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 ADAM22Q9P0K1 906 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 PRKAG2Q9UGJ0 569 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.34□□□□□ -0.91
DDB1-213ENST00000539332 USTQ9Y2C2 406 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 NME7Q9Y5B8 376 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 PCDHB7Q9Y5E2 793 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 ALG6Q9Y672 507 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 SCINQ9Y6U3 715 aa9.34□□□□□ -0.91
DDB1-213ENST00000539332 ABHD14A-ACY1A0A1B0GW23 586 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 PFKMP08237 780 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 HNRNPH1P31943 449 aaKnown RBP9.33□□□□□ -0.92
DDB1-213ENST00000539332 MAN1A1P33908 653 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 CTNNA1P35221 906 aaKnown RBP9.33□□□□□ -0.92
DDB1-213ENST00000539332 NDST1P52848 882 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 STILQ15468 1287 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 CFAP221Q4G0U5 840 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 NOMO2Q5JPE7 1267 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 PPP1R15BQ5SWA1 713 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 LIN9Q5TKA1 542 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 DCAF12L1Q5VU92 463 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 LCLAT1Q6UWP7 414 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.33□□□□□ -0.92
DDB1-213ENST00000539332 C7orf61Q8IZ16 206 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 C1orf131Q8NDD1 294 aaKnown RBP9.33□□□□□ -0.92
DDB1-213ENST00000539332 SPATA4Q8NEY3 305 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 BCAS4Q8TDM0 211 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 KBTBD7Q8WVZ9 684 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 PSMB7Q99436 277 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 C11orf70Q9BRQ4 267 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 NT5C1AQ9BXI3 368 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 MRPL47Q9HD33 250 aaKnown RBP9.33□□□□□ -0.92
DDB1-213ENST00000539332 LRFN2Q9ULH4 789 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 CEP83Q9Y592 693 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 PDE4DIPQ5VU43 2346 aa9.33□□□□□ -0.92
DDB1-213ENST00000539332 KCNK3O14649 394 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 SPTLC1O15269 473 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 HSF2BPO75031 334 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 CAPN15O75808 1086 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 COMTP21964 271 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 RPL9P32969 192 aaKnown RBP9.32□□□□□ -0.92
DDB1-213ENST00000539332 PAFAH1B1P43034 410 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 GABRB2P47870 512 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 TAF6P49848 677 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 PEX5P50542 639 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 EPHB4P54760 987 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 TUSC3Q13454 348 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 MAMLD1Q13495 774 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 SOWAHAQ2M3V2 549 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 SV2CQ496J9 727 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 PKDCCQ504Y2 493 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 GLE1Q53GS7 698 aaKnown RBP9.32□□□□□ -0.92
DDB1-213ENST00000539332 SGO2Q562F6 1265 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 DENND1BQ6P3S1 775 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 NPAS4Q8IUM7 802 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 CCDC50Q8IVM0 306 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 ABI1Q8IZP0 508 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 TOP6BLQ8N6T0 577 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 C3orf20Q8ND61 904 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 URGCPQ8TCY9 931 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 ALG3Q92685 438 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 MRPL45Q9BRJ2 306 aaKnown RBP9.32□□□□□ -0.92
DDB1-213ENST00000539332 HTATIP2Q9BUP3 242 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 IL23AQ9NPF7 189 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 EHD2Q9NZN4 543 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 CACNG4Q9UBN1 327 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 CHORDC1Q9UHD1 332 aaPredicted RBP9.32□□□□□ -0.92
DDB1-213ENST00000539332 CYTH4Q9UIA0 394 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 ANAPC7Q9UJX3 599 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 SNX9Q9Y5X1 595 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 VWA8A3KMH1 1905 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 CASTOR2A6NHX0 329 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 KPNA7A9QM74 516 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 PGRMC1O00264 195 aaKnown RBP9.32□□□□□ -0.92
DDB1-213ENST00000539332 HOXA2O43364 376 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 B4GALT3O60512 393 aa9.32□□□□□ -0.92
DDB1-213ENST00000539332 PEX14O75381 377 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms