RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 NKIRAS1Q9NYS0 192 aa26.14■■□□□ 1.78
RAB40C-204ENST00000538492 GGT7Q9UJ14 662 aa26.14■■□□□ 1.78
RAB40C-204ENST00000538492 CTCFP49711 727 aaPredicted RBP26.14■■□□□ 1.77
RAB40C-204ENST00000538492 SH3PXD2AQ5TCZ1 1133 aa26.14■■□□□ 1.77
RAB40C-204ENST00000538492 BBS12Q6ZW61 710 aa26.14■■□□□ 1.77
RAB40C-204ENST00000538492 CENPUQ71F23 418 aa26.14■■□□□ 1.77
RAB40C-204ENST00000538492 RFX6Q8HWS3 928 aa26.14■■□□□ 1.77
RAB40C-204ENST00000538492 P3H4Q92791 437 aa26.14■■□□□ 1.77
RAB40C-204ENST00000538492 CALN1Q9BXU9 219 aa26.14■■□□□ 1.77
RAB40C-204ENST00000538492 SLC40A1Q9NP59 571 aa26.14■■□□□ 1.77
RAB40C-204ENST00000538492 SHOC2Q9UQ13 582 aa26.14■■□□□ 1.77
RAB40C-204ENST00000538492 SPAG7O75391 227 aa26.13■■□□□ 1.77
RAB40C-204ENST00000538492 ANKRD22Q5VYY1 191 aa26.13■■□□□ 1.77
RAB40C-204ENST00000538492 TGS1Q96RS0 853 aaKnown RBP26.13■■□□□ 1.77
RAB40C-204ENST00000538492 ADPGKQ9BRR6 497 aa26.13■■□□□ 1.77
RAB40C-204ENST00000538492 ASB7Q9H672 318 aa26.13■■□□□ 1.77
RAB40C-204ENST00000538492 HAUS2Q9NVX0 235 aa26.13■■□□□ 1.77
RAB40C-204ENST00000538492 RNF8O76064 485 aa26.13■■□□□ 1.77
RAB40C-204ENST00000538492 ADCYAP1R1P41586 468 aa26.13■■□□□ 1.77
RAB40C-204ENST00000538492 RAB6CQ53S08 254 aa26.13■■□□□ 1.77
RAB40C-204ENST00000538492 ARHGEF18Q6ZSZ5 1173 aa26.13■■□□□ 1.77
RAB40C-204ENST00000538492 RSAD2Q8WXG1 361 aa26.13■■□□□ 1.77
RAB40C-204ENST00000538492 RAB6CQ9H0N0 254 aa26.13■■□□□ 1.77
RAB40C-204ENST00000538492 KIF9Q9HAQ2 790 aa26.13■■□□□ 1.77
RAB40C-204ENST00000538492 USP18Q9UMW8 372 aa26.13■■□□□ 1.77
RAB40C-204ENST00000538492 NDST1P52848 882 aa26.12■■□□□ 1.77
RAB40C-204ENST00000538492 MAMDC4Q6UXC1 1216 aa26.12■■□□□ 1.77
RAB40C-204ENST00000538492 LINC01465Q8N7H1 131 aa26.12■■□□□ 1.77
RAB40C-204ENST00000538492 MCRS1Q96EZ8 462 aa26.12■■□□□ 1.77
RAB40C-204ENST00000538492 PAIP2Q9BPZ3 127 aaKnown RBP26.12■■□□□ 1.77
RAB40C-204ENST00000538492 ABCF3Q9NUQ8 709 aa26.12■■□□□ 1.77
RAB40C-204ENST00000538492 EFR3BQ9Y2G0 817 aa26.12■■□□□ 1.77
RAB40C-204ENST00000538492 ALOX15BO15296 676 aa26.12■■□□□ 1.77
RAB40C-204ENST00000538492 P4HA1P13674 534 aa26.12■■□□□ 1.77
RAB40C-204ENST00000538492 ADORA2AP29274 412 aa26.12■■□□□ 1.77
RAB40C-204ENST00000538492 ATICP31939 592 aa26.12■■□□□ 1.77
RAB40C-204ENST00000538492 NRLP54845 237 aa26.12■■□□□ 1.77
RAB40C-204ENST00000538492 POU5F1BQ06416 359 aa26.12■■□□□ 1.77
RAB40C-204ENST00000538492 HIF1AQ16665 826 aa26.12■■□□□ 1.77
RAB40C-204ENST00000538492 TRPM8Q7Z2W7 1104 aa26.12■■□□□ 1.77
RAB40C-204ENST00000538492 PIWIL1Q96J94 861 aaKnown RBP26.12■■□□□ 1.77
RAB40C-204ENST00000538492 FARP1Q9Y4F1 1045 aaPredicted RBP26.12■■□□□ 1.77
RAB40C-204ENST00000538492 MAGEB2O15479 319 aa26.11■■□□□ 1.77
RAB40C-204ENST00000538492 GRAP2O75791 330 aa26.11■■□□□ 1.77
RAB40C-204ENST00000538492 FAM133BQ5BKY9 247 aaKnown RBP26.11■■□□□ 1.77
RAB40C-204ENST00000538492 FAM182AQ5T1J6 154 aa26.11■■□□□ 1.77
RAB40C-204ENST00000538492 UNC45BQ8IWX7 931 aa26.11■■□□□ 1.77
RAB40C-204ENST00000538492 RIBC1Q8N443 379 aaPredicted RBP26.11■■□□□ 1.77
RAB40C-204ENST00000538492 CPT1BQ92523 772 aa26.11■■□□□ 1.77
RAB40C-204ENST00000538492 USP15Q9Y4E8 981 aaPredicted RBP26.11■■□□□ 1.77
RAB40C-204ENST00000538492 GHRP10912 638 aa26.11■■□□□ 1.77
RAB40C-204ENST00000538492 VDRP11473 427 aa26.11■■□□□ 1.77
RAB40C-204ENST00000538492 CYP3A5P20815 502 aa26.11■■□□□ 1.77
RAB40C-204ENST00000538492 GSCP56915 257 aaPredicted RBP26.11■■□□□ 1.77
RAB40C-204ENST00000538492 MMRN1Q13201 1228 aa26.11■■□□□ 1.77
RAB40C-204ENST00000538492 PKN2Q16513 984 aaKnown RBP26.11■■□□□ 1.77
RAB40C-204ENST00000538492 CCDC142Q17RM4 750 aa26.11■■□□□ 1.77
RAB40C-204ENST00000538492 TRABD2AQ86V40 505 aa26.11■■□□□ 1.77
RAB40C-204ENST00000538492 C12orf29Q8N999 325 aa26.11■■□□□ 1.77
RAB40C-204ENST00000538492 TTC13Q8NBP0 860 aa26.11■■□□□ 1.77
RAB40C-204ENST00000538492 PEBP4Q96S96 227 aa26.11■■□□□ 1.77
RAB40C-204ENST00000538492 CYP3A43Q9HB55 503 aa26.11■■□□□ 1.77
RAB40C-204ENST00000538492 DPP3Q9NY33 737 aa26.11■■□□□ 1.77
RAB40C-204ENST00000538492 ACTL7BQ9Y614 415 aa26.11■■□□□ 1.77
RAB40C-204ENST00000538492 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.1■■□□□ 1.77
RAB40C-204ENST00000538492 RASSF9O75901 435 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 PIAS1O75925 651 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 TRUB2O95900 331 aaKnown RBP26.1■■□□□ 1.77
RAB40C-204ENST00000538492 OAS1P00973 400 aaKnown RBP26.1■■□□□ 1.77
RAB40C-204ENST00000538492 HMGCRP04035 888 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 KRT15P19012 456 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 RPL22P35268 128 aaKnown RBP26.1■■□□□ 1.77
RAB40C-204ENST00000538492 GABRB2P47870 512 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 TAZQ16635 292 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 MTHFD1LQ6UB35 978 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 FAM71DQ8N9W8 422 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 VRTNQ9H8Y1 702 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 BARX2Q9UMQ3 279 aaPredicted RBP26.1■■□□□ 1.77
RAB40C-204ENST00000538492 CITO14578 2027 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 ZSWIM8A7E2V4 1837 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 PLXNA1Q9UIW2 1896 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 TSPAN1O60635 241 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 CDO1Q16878 200 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 MSS51Q4VC12 460 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 FNBP1LQ5T0N5 605 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 IFNLR1Q8IU57 520 aaPredicted RBP26.1■■□□□ 1.77
RAB40C-204ENST00000538492 CMASQ8NFW8 434 aaPredicted RBP26.1■■□□□ 1.77
RAB40C-204ENST00000538492 PPTC7Q8NI37 304 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 ACAP3Q96P50 834 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 C16orf70Q9BSU1 422 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 CXCL16Q9H2A7 254 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 TRIP11Q15643 1979 aa26.1■■□□□ 1.77
RAB40C-204ENST00000538492 FAM47DPA6NHR8 397 aa26.09■■□□□ 1.77
RAB40C-204ENST00000538492 E5RJQ4 531 aa26.09■■□□□ 1.77
RAB40C-204ENST00000538492 C15orf59Q2T9L4 293 aaPredicted RBP26.09■■□□□ 1.77
RAB40C-204ENST00000538492 OR6B2Q6IFH4 312 aa26.09■■□□□ 1.77
RAB40C-204ENST00000538492 TRNP1Q6NT89 227 aa26.09■■□□□ 1.77
RAB40C-204ENST00000538492 PPIL6Q8IXY8 311 aa26.09■■□□□ 1.77
RAB40C-204ENST00000538492 SHCBP1Q8NEM2 672 aa26.09■■□□□ 1.77
RAB40C-204ENST00000538492 FAXDC2Q96IV6 333 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms