RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 ARL1P40616 181 aaPredicted RBP7.63□□□□□ -1.19
MSH6-209ENST00000538136 IFNAR2P48551 515 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 SULT1E1P49888 294 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 ARHGAP15Q53QZ3 475 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 WDR49Q8IV35 697 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 HS6ST3Q8IZP7 471 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 OR6K2Q8NGY2 324 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 GDAP1Q8TB36 358 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 PCED1BQ96HM7 432 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 TMEM176AQ96HP8 235 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 GDAP1L1Q96MZ0 367 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 SLC9A7Q96T83 725 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 MUC3BQ9H195 1237 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 SLC12A6Q9UHW9 1150 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 RBM47A0AV96 593 aaKnown RBP7.62□□□□□ -1.19
MSH6-209ENST00000538136 E5RJQ4 531 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 H7C0C1 242 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 HAS3O00219 553 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 LINC01565O15544 149 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 EFCAB14O75071 495 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 KRT3P12035 628 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 ATP5OP48047 213 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 NCKAP1LP55160 1127 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 PHLDB3Q6NSJ2 640 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 RFWD3Q6PCD5 774 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 RNF19BQ6ZMZ0 732 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 FRMD5Q7Z6J6 570 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 ZC3H18Q86VM9 953 aaKnown RBP7.62□□□□□ -1.19
MSH6-209ENST00000538136 DENND1CQ8IV53 801 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 DHX40Q8IX18 779 aaKnown RBP7.62□□□□□ -1.19
MSH6-209ENST00000538136 KIAA1524Q8TCG1 905 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 CELF6Q96J87 481 aaKnown RBP7.62□□□□□ -1.19
MSH6-209ENST00000538136 AGAP3Q96P47 875 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 MIR1-1HGQ9H1L0 117 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 TRIM10Q9UDY6 481 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 CA14Q9ULX7 337 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 ATP8B3O60423 1300 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 SPTBN4Q9H254 2564 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 LOC102724159A0A0B4J2E5 919 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 SMIM23A6NLE4 172 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 ARHGEF15O94989 841 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 PNPLA4P41247 253 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 BPIFB4P59827 614 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 PWP2Q15269 919 aaKnown RBP7.62□□□□□ -1.19
MSH6-209ENST00000538136 PTPN14Q15678 1187 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 TEX35Q5T0J7 233 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 SYT10Q6XYQ8 523 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 ZNF606Q8WXB4 792 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 ZNF516Q92618 1163 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 TWNKQ96RR1 684 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 MBLAC1A4D2B0 266 aaPredicted RBP7.62□□□□□ -1.19
MSH6-209ENST00000538136 H0Y626 953 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 KCNK3O14649 394 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 EOMESO95936 686 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 SAT1P21673 171 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 SEMG2Q02383 582 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 CDH18Q13634 790 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 TCTN1Q2MV58 587 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 TRIM68Q6AZZ1 485 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 RFX6Q8HWS3 928 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 KCTD6Q8NC69 237 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 UHMK1Q8TAS1 419 aaKnown RBP7.62□□□□□ -1.19
MSH6-209ENST00000538136 PLEKHO2Q8TD55 490 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 VANGL2Q9ULK5 521 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 EPN1Q9Y6I3 576 aaPredicted RBP7.62□□□□□ -1.19
MSH6-209ENST00000538136 SCN4AP35499 1836 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 COL1A2P08123 1366 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 E7EVH7 732 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 MAP3K13O43283 966 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 TLR5O60602 858 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 MOCS3O95396 460 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 APOEP02649 317 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 CCDC175P0C221 793 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 SCP2P22307 547 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 CST5P28325 142 aaPredicted RBP7.62□□□□□ -1.19
MSH6-209ENST00000538136 GDI1P31150 447 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 DEUP1Q05D60 604 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 KDSRQ06136 332 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 MCL1Q07820 350 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 EDRF1Q3B7T1 1238 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 ZC3H12AQ5D1E8 599 aaKnown RBP7.62□□□□□ -1.19
MSH6-209ENST00000538136 HP1BP3Q5SSJ5 553 aaPredicted RBP7.62□□□□□ -1.19
MSH6-209ENST00000538136 STXBP5Q5T5C0 1151 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 DENND1BQ6P3S1 775 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 DNAJB7Q7Z6W7 309 aaPredicted RBP7.62□□□□□ -1.19
MSH6-209ENST00000538136 NOP9Q86U38 636 aaKnown RBP7.62□□□□□ -1.19
MSH6-209ENST00000538136 CHPFQ8IZ52 775 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 RGL4Q8IZJ4 473 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 EXOC2Q96KP1 924 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 SNX27Q96L92 541 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 ALS2CR12Q96Q35 445 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 EBF3Q9H4W6 596 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 WNT6Q9Y6F9 365 aa7.62□□□□□ -1.19
MSH6-209ENST00000538136 DDX60LQ5H9U9 1706 aaKnown RBP7.61□□□□□ -1.19
MSH6-209ENST00000538136 GOLGA6L9A6NEM1 432 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 B4GALT3O60512 393 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 TBXAS1P24557 533 aaPredicted RBP7.61□□□□□ -1.19
MSH6-209ENST00000538136 LHX1P48742 406 aa7.61□□□□□ -1.19
MSH6-209ENST00000538136 HARS2P49590 506 aaKnown RBP7.61□□□□□ -1.19
MSH6-209ENST00000538136 EPHB1P54762 984 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms