RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 ACADSBP45954 432 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 ZNF268Q14587 947 aaPredicted RBP13.04□□□□□ -0.32
DDB1-209ENST00000537877 DNAJC24Q6P3W2 148 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 C4orf50Q6ZRC1 276 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 PAQR9Q6ZVX9 377 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 ANKS3Q6ZW76 656 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 TMCO2Q7Z6W1 182 aaPredicted RBP13.04□□□□□ -0.32
DDB1-209ENST00000537877 SLFN11Q7Z7L1 901 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 TMEM173Q86WV6 379 aaPredicted RBP13.04□□□□□ -0.32
DDB1-209ENST00000537877 DCP1BQ8IZD4 617 aaKnown RBP13.04□□□□□ -0.32
DDB1-209ENST00000537877 COLGALT1Q8NBJ5 622 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 BCL7CQ8WUZ0 217 aaPredicted RBP13.04□□□□□ -0.32
DDB1-209ENST00000537877 MYLPFQ96A32 169 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 SMARCD1Q96GM5 515 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 HSFY1Q96LI6 401 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 LPIN3Q9BQK8 851 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 SLC4A5Q9BY07 1137 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 B3GNT5Q9BYG0 378 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 ZCWPW1Q9H0M4 648 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 AAASQ9NRG9 546 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 KRT82Q9NSB4 513 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 STK39Q9UEW8 545 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 INSL6Q9Y581 213 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 SLC4A7Q9Y6M7 1214 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 NLRC5Q86WI3 1866 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 FANCGO15287 622 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 BUB1BO60566 1050 aaPredicted RBP13.03□□□□□ -0.32
DDB1-209ENST00000537877 ERBB2P04626 1255 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 RPL34P49207 117 aaKnown RBP13.03□□□□□ -0.32
DDB1-209ENST00000537877 MAMLD1Q13495 774 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 NFE2Q16621 373 aaPredicted RBP13.03□□□□□ -0.32
DDB1-209ENST00000537877 CCDC142Q17RM4 750 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 USP41Q3LFD5 358 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 CTXN3Q4LDR2 81 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 C2CD6Q53TS8 623 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 DAAM2Q86T65 1068 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 TMEM110Q86TL2 294 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 XYLT1Q86Y38 959 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 ZDHHC17Q8IUH5 632 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 HERC6Q8IVU3 1022 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 FIBCD1Q8N539 461 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 DPF3Q92784 378 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 MCRS1Q96EZ8 462 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 TMEM169Q96HH4 297 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 ZBED2Q9BTP6 218 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 TTPALQ9BTX7 342 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 HERC2P3Q9BVR0 1158 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 ST7Q9NRC1 585 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 SPG21Q9NZD8 308 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 CXXC1Q9P0U4 656 aaPredicted RBP13.03□□□□□ -0.32
DDB1-209ENST00000537877 ANAPC7Q9UJX3 599 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 PTPRDP23468 1912 aa13.03□□□□□ -0.32
DDB1-209ENST00000537877 PATJQ8NI35 1801 aa13.02□□□□□ -0.32
DDB1-209ENST00000537877 E5RJQ4 531 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 CLDN5O00501 218 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 AP1G2O75843 785 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 ATP2A2P16615 1042 aaKnown RBP13.02□□□□□ -0.33
DDB1-209ENST00000537877 SCNN1AP37088 669 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 SMARCB1Q12824 385 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 TUBB2AQ13885 445 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 RTP2Q5QGT7 225 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 PPP1R15BQ5SWA1 713 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 COL13A1Q5TAT6 717 aaPredicted RBP13.02□□□□□ -0.33
DDB1-209ENST00000537877 CYP4A22Q5TCH4 519 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 RASIP1Q5U651 963 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 PAPD7Q5XG87 772 aaKnown RBP13.02□□□□□ -0.33
DDB1-209ENST00000537877 PMF1Q6P1K2 205 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 CLEC20AQ6ZU45 233 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 CEP57Q86XR8 500 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 SPATA2LQ8IUW3 424 aaPredicted RBP13.02□□□□□ -0.33
DDB1-209ENST00000537877 FEZF2Q8TBJ5 459 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 SP7Q8TDD2 431 aaPredicted RBP13.02□□□□□ -0.33
DDB1-209ENST00000537877 PIK3R5Q8WYR1 880 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 KCTD13Q8WZ19 329 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 FUBP3Q96I24 572 aaKnown RBP eCLIP13.02□□□□□ -0.33
DDB1-209ENST00000537877 TMEM209Q96SK2 561 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 RAD9AQ99638 391 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 TUBB2BQ9BVA1 445 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 SELENOOQ9BVL4 669 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 UBXN6Q9BZV1 441 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 CSNK1G1Q9HCP0 422 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 ABCB6Q9NP58 842 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 PNPLA8Q9NP80 782 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 DMAP1Q9NPF5 467 aaPredicted RBP13.02□□□□□ -0.33
DDB1-209ENST00000537877 PCDH10Q9P2E7 1040 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 NR2E3Q9Y5X4 410 aa13.02□□□□□ -0.33
DDB1-209ENST00000537877 MYH10P35580 1976 aa13.01□□□□□ -0.33
DDB1-209ENST00000537877 CCDC85CA6NKD9 419 aa13.01□□□□□ -0.33
DDB1-209ENST00000537877 SIGLEC16A6NMB1 481 aa13.01□□□□□ -0.33
DDB1-209ENST00000537877 MYO1FO00160 1098 aa13.01□□□□□ -0.33
DDB1-209ENST00000537877 TULP2O00295 520 aa13.01□□□□□ -0.33
DDB1-209ENST00000537877 TBC1D4O60343 1298 aa13.01□□□□□ -0.33
DDB1-209ENST00000537877 FTCDO95954 541 aa13.01□□□□□ -0.33
DDB1-209ENST00000537877 SOD2P04179 222 aa13.01□□□□□ -0.33
DDB1-209ENST00000537877 ATP1A1P05023 1023 aaKnown RBP13.01□□□□□ -0.33
DDB1-209ENST00000537877 RGS7P49802 495 aa13.01□□□□□ -0.33
DDB1-209ENST00000537877 CFAP221Q4G0U5 840 aa13.01□□□□□ -0.33
DDB1-209ENST00000537877 MEI1Q5TIA1 1274 aa13.01□□□□□ -0.33
DDB1-209ENST00000537877 LLGL2Q6P1M3 1020 aa13.01□□□□□ -0.33
DDB1-209ENST00000537877 PEX26Q7Z412 305 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms