RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 XAB2Q9HCS7 855 aaKnown RBP12.78□□□□□ -0.36
CIT-208ENST00000537607 INTS13Q9NVM9 706 aa12.78□□□□□ -0.36
CIT-208ENST00000537607 SNTG2Q9NY99 539 aa12.78□□□□□ -0.36
CIT-208ENST00000537607 RPS6KL1Q9Y6S9 549 aa12.78□□□□□ -0.36
CIT-208ENST00000537607 ZNF197O14709 1029 aa12.78□□□□□ -0.36
CIT-208ENST00000537607 AKT1P31749 480 aa12.78□□□□□ -0.36
CIT-208ENST00000537607 ALDH1A3P47895 512 aa12.78□□□□□ -0.36
CIT-208ENST00000537607 CASP5P51878 434 aa12.78□□□□□ -0.36
CIT-208ENST00000537607 DNAJC3Q13217 504 aa12.78□□□□□ -0.36
CIT-208ENST00000537607 CLEC16AQ2KHT3 1053 aa12.78□□□□□ -0.36
CIT-208ENST00000537607 FBXO47Q5MNV8 452 aa12.78□□□□□ -0.36
CIT-208ENST00000537607 DDX53Q86TM3 631 aaKnown RBP12.78□□□□□ -0.36
CIT-208ENST00000537607 EPS8L3Q8TE67 593 aaKnown RBP12.78□□□□□ -0.36
CIT-208ENST00000537607 CDCA5Q96FF9 252 aa12.78□□□□□ -0.36
CIT-208ENST00000537607 NDE1Q9NXR1 346 aa12.78□□□□□ -0.36
CIT-208ENST00000537607 LRRIQ3A6PVS8 624 aaPredicted RBP12.77□□□□□ -0.36
CIT-208ENST00000537607 PDHA1P08559 390 aa12.77□□□□□ -0.36
CIT-208ENST00000537607 RAD23BP54727 409 aa12.77□□□□□ -0.36
CIT-208ENST00000537607 GRIK4Q16099 956 aa12.77□□□□□ -0.36
CIT-208ENST00000537607 GPC2Q8N158 579 aa12.77□□□□□ -0.36
CIT-208ENST00000537607 ACTL9Q8TC94 416 aa12.77□□□□□ -0.36
CIT-208ENST00000537607 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.77□□□□□ -0.36
CIT-208ENST00000537607 SH3BP1Q9Y3L3 701 aa12.77□□□□□ -0.36
CIT-208ENST00000537607 A0A0A6YYK5 440 aaPredicted RBP12.77□□□□□ -0.37
CIT-208ENST00000537607 EIF4E1BA6NMX2 242 aaKnown RBP12.77□□□□□ -0.37
CIT-208ENST00000537607 ADCY3O60266 1144 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 ASMTLO95671 621 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 GLI1P08151 1106 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 ADORA2AP29274 412 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 GEMIN4P57678 1058 aaKnown RBP12.77□□□□□ -0.37
CIT-208ENST00000537607 AP2B1P63010 937 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 DNAJB3Q8WWF6 145 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 DACT3Q96B18 629 aaPredicted RBP12.77□□□□□ -0.37
CIT-208ENST00000537607 SGF29Q96ES7 293 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 TSPAN17Q96FV3 270 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 MTIF3Q9H2K0 278 aaKnown RBP12.77□□□□□ -0.37
CIT-208ENST00000537607 EML4Q9HC35 981 aaKnown RBP12.77□□□□□ -0.37
CIT-208ENST00000537607 MRPL40Q9NQ50 206 aaKnown RBP12.77□□□□□ -0.37
CIT-208ENST00000537607 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.77□□□□□ -0.37
CIT-208ENST00000537607 GRID1Q9ULK0 1009 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 USP18Q9UMW8 372 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 TIMM13Q9Y5L4 95 aaPredicted RBP12.77□□□□□ -0.37
CIT-208ENST00000537607 DDX3XO00571 662 aaKnown RBP eCLIP12.77□□□□□ -0.37
CIT-208ENST00000537607 TFRCP02786 760 aaKnown RBP12.77□□□□□ -0.37
CIT-208ENST00000537607 H2AFXP16104 143 aaPredicted RBP12.77□□□□□ -0.37
CIT-208ENST00000537607 BMP6P22004 513 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 ST8SIA6P61647 398 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 CBWD6Q4V339 395 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 CBWD3Q5JTY5 395 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 CBWD5Q5RIA9 395 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 DENND5BQ6ZUT9 1274 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 PARP9Q8IXQ6 854 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 ARMC2Q8NEN0 867 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 CYP3A43Q9HB55 503 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 TMCC1O94876 653 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 SYF2O95926 243 aaKnown RBP12.77□□□□□ -0.37
CIT-208ENST00000537607 CYP3A4P08684 503 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 PYGBP11216 843 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 AKAP5P24588 427 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 HMOX2P30519 316 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 CDH8P55286 799 aa12.77□□□□□ -0.37
CIT-208ENST00000537607 ST13P4Q8IZP2 240 aaPredicted RBP12.77□□□□□ -0.37
CIT-208ENST00000537607 FRMD8Q9BZ67 464 aaPredicted RBP12.77□□□□□ -0.37
CIT-208ENST00000537607 CAMTA1Q9Y6Y1 1673 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 PLA2G4AP47712 749 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 ARHGDIAP52565 204 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 TBX2Q13207 712 aaPredicted RBP12.76□□□□□ -0.37
CIT-208ENST00000537607 HIC1Q14526 733 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 LRRC8EQ6NSJ5 796 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 SPOCD1Q6ZMY3 1216 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 CCDC60Q8IWA6 550 aaPredicted RBP12.76□□□□□ -0.37
CIT-208ENST00000537607 MCOLN2Q8IZK6 566 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 RIBC1Q8N443 379 aaPredicted RBP12.76□□□□□ -0.37
CIT-208ENST00000537607 EXD1Q8NHP7 514 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 CXorf38Q8TB03 319 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 CALML6Q8TD86 181 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 PURBQ96QR8 312 aaKnown RBP12.76□□□□□ -0.37
CIT-208ENST00000537607 FAM167BQ9BTA0 163 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 ZSCAN5CA6NGD5 496 aaPredicted RBP12.76□□□□□ -0.37
CIT-208ENST00000537607 CASTOR2A6NHX0 329 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 LSM8O95777 96 aaKnown RBP12.76□□□□□ -0.37
CIT-208ENST00000537607 HIST1H2AGP0C0S8 130 aaPredicted RBP12.76□□□□□ -0.37
CIT-208ENST00000537607 MYL2P10916 166 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 HIST1H2ADP20671 130 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 TM4SF1P30408 202 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 AARSP49588 968 aaKnown RBP eCLIP12.76□□□□□ -0.37
CIT-208ENST00000537607 MAP3K7CLP57077 242 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 C6orf10Q5SRN2 563 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 TDRD10Q5VZ19 366 aaKnown RBP12.76□□□□□ -0.37
CIT-208ENST00000537607 C4orf22Q6V702 233 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 SLFN11Q7Z7L1 901 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 SRLQ86TD4 932 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 FBXO36Q8NEA4 188 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 SHCBP1Q8NEM2 672 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 HIST1H2AHQ96KK5 128 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 HIST1H2AJQ99878 128 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 H2AFJQ9BTM1 129 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 MRIQ9BWK5 157 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 KCNMB3Q9NPA1 279 aa12.76□□□□□ -0.37
CIT-208ENST00000537607 AP4E1Q9UPM8 1137 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms