RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 CALCOCO2Q13137 446 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 CCNG2Q16589 344 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 NBPF20Q3BBV1 942 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 PMF1Q6P1K2 205 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 FAM228AQ86W67 206 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 TTC30AQ86WT1 665 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 NIPA2Q8N8Q9 360 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 SMG8Q8ND04 991 aaKnown RBP18.38■□□□□ 0.53
SNX17-210ENST00000537606 CACNG4Q9UBN1 327 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 DNPEPQ9ULA0 475 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 UBQLN1Q9UMX0 589 aaKnown RBP18.38■□□□□ 0.53
SNX17-210ENST00000537606 TLL2Q9Y6L7 1015 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 TLDC2A0PJX2 215 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 MEIS3P2A8K0S8 358 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 A8MXQ7 604 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 CD48P09326 243 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 GNAT1P11488 350 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 LMO2P25791 158 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 AXLP30530 894 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 LSP1P33241 339 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 ADCY8P40145 1251 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 CETN2P41208 172 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 SEC24CP53992 1094 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 CAP1Q01518 475 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 SLC25A11Q02978 314 aaKnown RBP18.37■□□□□ 0.53
SNX17-210ENST00000537606 LRRC38Q5VT99 294 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 FAM183BPQ6ZVS7 135 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 GSTA5Q7RTV2 222 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 SLCO2A1Q92959 643 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 MCRS1Q96EZ8 462 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 ZFP42Q96MM3 310 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 PWWP2AQ96N64 755 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 WDR35Q9P2L0 1181 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 MTRF1LQ9UGC7 380 aaKnown RBP18.37■□□□□ 0.53
SNX17-210ENST00000537606 CA12O43570 354 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 IVDP26440 423 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 GABRB2P47870 512 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 PCBP1Q15365 356 aaKnown RBP eCLIP18.37■□□□□ 0.534e-22■■■■■ 62.2
SNX17-210ENST00000537606 DENND2CQ68D51 928 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 GDF6Q6KF10 455 aaPredicted RBP18.37■□□□□ 0.53
SNX17-210ENST00000537606 TRNP1Q6NT89 227 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 GLIS1Q8NBF1 620 aa18.37■□□□□ 0.53
SNX17-210ENST00000537606 hCG_1818297A0A087WSY0 165 aa18.36■□□□□ 0.53
SNX17-210ENST00000537606 TJP3O95049 919 aa18.36■□□□□ 0.53
SNX17-210ENST00000537606 GAS8O95995 478 aa18.36■□□□□ 0.53
SNX17-210ENST00000537606 FGFR1P11362 822 aa18.36■□□□□ 0.53
SNX17-210ENST00000537606 IBSPP21815 317 aaPredicted RBP18.36■□□□□ 0.53
SNX17-210ENST00000537606 CHKAP35790 457 aa18.36■□□□□ 0.53
SNX17-210ENST00000537606 MDH1P40925 334 aaKnown RBP18.36■□□□□ 0.53
SNX17-210ENST00000537606 CDKN2BP42772 138 aa18.36■□□□□ 0.53
SNX17-210ENST00000537606 CDO1Q16878 200 aa18.36■□□□□ 0.53
SNX17-210ENST00000537606 FBXO47Q5MNV8 452 aa18.36■□□□□ 0.53
SNX17-210ENST00000537606 CYP4F22Q6NT55 531 aa18.36■□□□□ 0.53
SNX17-210ENST00000537606 SCUBE3Q8IX30 993 aa18.36■□□□□ 0.53
SNX17-210ENST00000537606 IPO4Q8TEX9 1081 aaKnown RBP18.36■□□□□ 0.53
SNX17-210ENST00000537606 CDY2AQ9Y6F7 541 aa18.36■□□□□ 0.53
SNX17-210ENST00000537606 PIRO00625 290 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 ZSCAN5DPP0CG00 497 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 CYBAP13498 195 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 MIPP30301 263 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 ITGA8P53708 1063 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 PRKCZQ05513 592 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 PTK6Q13882 451 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 C15orf59Q2T9L4 293 aaPredicted RBP18.35■□□□□ 0.53
SNX17-210ENST00000537606 TFDP3Q5H9I0 405 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 EMC10Q5UCC4 262 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 LRRC52Q8N7C0 313 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 GRK7Q8WTQ7 553 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 HSPH1Q92598 858 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 B3GNT5Q9BYG0 378 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 OSBPL7Q9BZF2 842 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 C10orf88Q9H8K7 445 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 KPNA7A9QM74 516 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 CCDC130P13994 396 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 ETS1P14921 441 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 HOXC8P31273 242 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 SLCO1A2P46721 670 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 ZNF365Q70YC5 407 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 NME8Q8N427 588 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 AAASQ9NRG9 546 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 HOMER3Q9NSC5 361 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 KIAA1257Q9ULG3 409 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 ZNF148Q9UQR1 794 aa18.35■□□□□ 0.53
SNX17-210ENST00000537606 RRP15Q9Y3B9 282 aaKnown RBP18.35■□□□□ 0.53
SNX17-210ENST00000537606 C3orf70A6NLC5 250 aaPredicted RBP18.34■□□□□ 0.53
SNX17-210ENST00000537606 LIASO43766 372 aa18.34■□□□□ 0.53
SNX17-210ENST00000537606 ATF2P15336 505 aa18.34■□□□□ 0.53
SNX17-210ENST00000537606 ADORA2BP29275 332 aa18.34■□□□□ 0.53
SNX17-210ENST00000537606 AFF1P51825 1210 aaKnown RBP18.34■□□□□ 0.53
SNX17-210ENST00000537606 FCGRTP55899 365 aa18.34■□□□□ 0.53
SNX17-210ENST00000537606 PLCB3Q01970 1234 aa18.34■□□□□ 0.53
SNX17-210ENST00000537606 HADHQ16836 314 aaKnown RBP18.34■□□□□ 0.53
SNX17-210ENST00000537606 FNIP1Q8TF40 1166 aa18.34■□□□□ 0.53
SNX17-210ENST00000537606 KBTBD7Q8WVZ9 684 aa18.34■□□□□ 0.53
SNX17-210ENST00000537606 RXFP2Q8WXD0 754 aa18.34■□□□□ 0.53
SNX17-210ENST00000537606 SNF8Q96H20 258 aa18.34■□□□□ 0.53
SNX17-210ENST00000537606 MTG1Q9BT17 334 aaPredicted RBP18.34■□□□□ 0.53
SNX17-210ENST00000537606 DDX23Q9BUQ8 820 aaKnown RBP18.34■□□□□ 0.53
SNX17-210ENST00000537606 MIS12Q9H081 205 aa18.34■□□□□ 0.53
SNX17-210ENST00000537606 DDX56Q9NY93 547 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms