RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 CHSY1Q86X52 802 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 LRRC49Q8IUZ0 686 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 SLC30A5Q8TAD4 765 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 USP33Q8TEY7 942 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 ZNF75CPQ92670 426 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 NCLNQ969V3 563 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 E2F7Q96AV8 911 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 ATXN7L3BQ96GX2 97 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 COQ7Q99807 217 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 FRMD8P1Q9BZ68 369 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 FHDC1Q9C0D6 1143 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 CLIC5Q9NZA1 410 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 A0A087X0B3 334 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 EIF4BP23588 611 aaKnown RBP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 MAPK10P53779 464 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 TMC5Q6UXY8 1006 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 RHOT1Q8IXI2 618 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 PBXIP1Q96AQ6 731 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 SKA1Q96BD8 255 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 COX4I2Q96KJ9 171 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 NLRP4Q96MN2 994 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 PAIP1Q9H074 479 aaKnown RBP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 TEKT2Q9UIF3 430 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 PTBP2Q9UKA9 531 aaKnown RBP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 LRP6O75581 1613 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 TMEM247A6NEH6 219 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 GSG1L2A8MUP6 293 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 SERPINI2O75830 405 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 TM7SF2O76062 418 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 POLR2MP0CAP2 368 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 FXR2P51116 673 aaKnown RBP eCLIP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 GEMIN4P57678 1058 aaKnown RBP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 SETD3Q86TU7 594 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 FBXO11Q86XK2 927 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 CMTM5Q96DZ9 223 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 STK33Q9BYT3 514 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 ZNF180Q9UJW8 692 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 DSEQ9UL01 958 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 TRIM16O95361 564 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 SRGAP2CP0DJJ0 459 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 SRGAP2BP0DMP2 458 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 GALK1P51570 392 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 COL9A3Q14050 684 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 MORF4L2Q15014 288 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 OR6B2Q6IFH4 312 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 MIGA2Q7L4E1 593 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 FBXL13Q8NEE6 735 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 SH3GL1Q99961 368 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 ANO3Q9BYT9 981 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 TMEM117Q9H0C3 514 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 NOL6Q9H6R4 1146 aaKnown RBP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 MOV10Q9HCE1 1003 aaKnown RBP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 SOX13Q9UN79 622 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 USP17L5A8MUK1 530 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 IDH3BO43837 385 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 MTA2O94776 668 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 APOA1P02647 267 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 SERPINB10P48595 397 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 AQP5P55064 265 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 CDK16Q00536 496 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 ANO4Q32M45 955 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 CPXCR1Q8N123 301 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 TNIP2Q8NFZ5 429 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 ANKRD36BP1Q96IX9 119 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 EPB41L4AQ9HCS5 686 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-213ENST00000537002 PCSK1NQ9UHG2 260 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 MID2Q9UJV3 735 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 KIF1AQ12756 1690 aa5.62□□□□□ -1.51
PTPRD-213ENST00000537002 NUDT2P50583 147 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 TRIM25Q14258 630 aaKnown RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 MYBPC2Q14324 1141 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 SLC13A5Q86YT5 568 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 CCDC33Q8N5R6 958 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 SLC7A6OSQ96CW6 309 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 OTUD5Q96G74 571 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ZNF577Q9BSK1 485 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ARMCX1Q9P291 453 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 CHKBQ9Y259 395 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 B3GNT3Q9Y2A9 372 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 TBC1D30Q9Y2I9 924 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ARIH1Q9Y4X5 557 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 HTR3EA5X5Y0 456 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 PRPSAP2O60256 369 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 TNNC2P02585 160 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 WEE2P0C1S8 567 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 RARBP10826 455 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 PSMC3P17980 439 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 OSBPP22059 807 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 PTK6Q13882 451 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 RBM44Q6ZP01 1051 aaKnown RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 RAB44Q7Z6P3 723 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 CCDC103Q8IW40 242 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 RYBPQ8N488 228 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-213ENST00000537002 MARVELD2Q8N4S9 558 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 RREB1Q92766 1687 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 ZNF696Q9H7X3 374 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 OSGEPQ9NPF4 335 aa5.61□□□□□ -1.51
PTPRD-213ENST00000537002 IGSF9Q9P2J2 1179 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms