RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 KINO60870 393 aaKnown RBP15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 TACC1O75410 805 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 PTPN1P18031 435 aaKnown RBP15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 ANXA13P27216 316 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 ATICP31939 592 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 RAP1GAPP47736 663 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 MLLT6P55198 1093 aaPredicted RBP15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 DLG4P78352 724 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 PON2Q15165 354 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 ZNF699Q32M78 642 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 ITPRIPL2Q3MIP1 535 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 TRIM68Q6AZZ1 485 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 VSTM1Q6UX27 236 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 SCARA5Q6ZMJ2 495 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 KRBA2Q6ZNG9 492 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 RALGPS2Q86X27 583 aaPredicted RBP15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 RIN3Q8TB24 985 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 MYCBPAPQ8TBZ2 947 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 ATRIPQ8WXE1 791 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 MYRFLQ96LU7 910 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 HINFPQ9BQA5 517 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 XYLT2Q9H1B5 865 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 SMYD3Q9H7B4 428 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 PRMT8Q9NR22 394 aaPredicted RBP15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 MAPK8IP1Q9UQF2 711 aa15.25■□□□□ 0.03
RTN3P1-201ENST00000536295 TRAV19A0A0A6YYK7 116 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 FAM237AA0A1B0GTK4 181 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 A0A1W2PQ27 194 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 A0A1W2PQ64 194 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 A0A1W2PQD8 194 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 C2orf78A6NCI8 922 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 CALUO43852 315 aaPredicted RBP15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 STAU1O95793 577 aaKnown RBP15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 CKMP06732 381 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 CDH8P55286 799 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 USP46P62068 366 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 DPYDQ12882 1025 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 NCOA4Q13772 614 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 LRRC32Q14392 662 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 CC2D1AQ6P1N0 951 aaPredicted RBP15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 C1orf228Q6PIY5 440 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 SLC9A9Q8IVB4 645 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 ARL14EPQ8N8R7 260 aaPredicted RBP15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 SPATA17Q96L03 361 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 SLC22A12Q96S37 553 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 EBF3Q9H4W6 596 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 KIF9Q9HAQ2 790 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 ZSCAN32Q9NX65 697 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 FRMD4BQ9Y2L6 1034 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 PCDHGA2Q9Y5H1 932 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 F5P12259 2224 aa15.24■□□□□ 0.03
RTN3P1-201ENST00000536295 OBSL1O75147 1896 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 F8VP50 259 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 CLDN5O00501 218 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 TRIM66O15016 1216 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 RHOBTB3O94955 611 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 ZNF202O95125 648 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 KIF20AO95235 890 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 VNN1O95497 513 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 C4BPAP04003 597 aaKnown RBP15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 FAM163BP0C2L3 166 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 USP17L7P0C7H9 530 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 ARSAP15289 507 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 AP3M2P53677 418 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 CACNA2D1P54289 1103 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 IFRD2Q12894 506 aaPredicted RBP15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 RUNX3Q13761 415 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 GAS6Q14393 721 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 KCNB1Q14721 858 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 ZNF667Q5HYK9 610 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 WDR44Q5JSH3 913 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 Q6ZS52 159 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 DENND5BQ6ZUT9 1274 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 B3GALNT2Q8NCR0 500 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 FAM83CQ9BQN1 747 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 ZNF518BQ9C0D4 1074 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 HPS4Q9NQG7 708 aa15.23■□□□□ 0.03
RTN3P1-201ENST00000536295 DENND4CQ5VZ89 1909 aa15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 OTOL1A6NHN0 477 aaPredicted RBP15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 SOBPA7XYQ1 873 aa15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 ABL1P00519 1130 aa15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 CXCL12P48061 93 aa15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 CCR3P51677 355 aa15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 CLDN10P78369 228 aa15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 SATB1Q01826 763 aa15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 FAM160A1Q05DH4 1040 aa15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 BECN1Q14457 450 aa15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 ZNF268Q14587 947 aaPredicted RBP15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 PPP2R5DQ14738 602 aa15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 MTF1Q14872 753 aa15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 DGKKQ5KSL6 1271 aa15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 IER2Q9BTL4 223 aa15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 MED10Q9BTT4 135 aa15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 B3GNT5Q9BYG0 378 aa15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 TRPM5Q9NZQ8 1165 aa15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 TRAF3IP3Q9Y228 551 aa15.22■□□□□ 0.03
RTN3P1-201ENST00000536295 CFAP54Q96N23 3096 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 PTPRZ1P23471 2315 aaPredicted RBP15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 HDCP19113 662 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms