RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 PPP1R2P3Q6NXS1 205 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 TLDC1Q6P9B6 456 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 CEP128Q6ZU80 1094 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 MON1BQ7L1V2 547 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 KRT27Q7Z3Y8 459 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 USP37Q86T82 979 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 GPD1LQ8N335 351 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 RIBC1Q8N443 379 aaPredicted RBP6.07□□□□□ -1.44
VPS33A-203ENST00000536212 GBP7Q8N8V2 638 aaPredicted RBP6.07□□□□□ -1.44
VPS33A-203ENST00000536212 ATL2Q8NHH9 583 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 CCHCR1Q8TD31 782 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 C1orf54Q8WWF1 131 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 LPAR1Q92633 364 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 GRAMD1AQ96CP6 724 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 CRELD1Q96HD1 420 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 ZBED3Q96IU2 234 aaPredicted RBP6.07□□□□□ -1.44
VPS33A-203ENST00000536212 VCPIP1Q96JH7 1222 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 POP1Q99575 1024 aaKnown RBP6.07□□□□□ -1.44
VPS33A-203ENST00000536212 HERPUD2Q9BSE4 406 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 DDX23Q9BUQ8 820 aaKnown RBP6.07□□□□□ -1.44
VPS33A-203ENST00000536212 MTFR1LQ9H019 292 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 KIAA1586Q9HCI6 787 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 NPHS2Q9NP85 383 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 ACP6Q9NPH0 428 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 GPRC5CQ9NQ84 441 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 GINM1Q9NU53 330 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 NDFIP2Q9NV92 336 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 NINJ2Q9NZG7 142 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 CNTN3Q9P232 1028 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 CHORDC1Q9UHD1 332 aaPredicted RBP6.07□□□□□ -1.44
VPS33A-203ENST00000536212 ANAPC7Q9UJX3 599 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 CNTN6Q9UQ52 1028 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 USP15Q9Y4E8 981 aaPredicted RBP6.07□□□□□ -1.44
VPS33A-203ENST00000536212 PCDHB2Q9Y5E7 798 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 STYXL1Q9Y6J8 313 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 UMODL1Q5DID0 1318 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 ADGRA3Q8IWK6 1321 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 DENND3A2RUS2 1198 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 SMIM23A6NLE4 172 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 TCP11X1B4DZS4 312 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 H0YCG3 227 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 MAGEB2O15479 319 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 BNIP3LO60238 219 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 DKC1O60832 514 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS33A-203ENST00000536212 SUN1O94901 812 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 UBOX5O94941 541 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 ATP6V1G2O95670 118 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 PIGRP01833 764 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 C4BPAP04003 597 aaKnown RBP6.06□□□□□ -1.44
VPS33A-203ENST00000536212 ASNSP08243 561 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 ATF2P15336 505 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 NQO1P15559 274 aaKnown RBP6.06□□□□□ -1.44
VPS33A-203ENST00000536212 ACO1P21399 889 aaKnown RBP6.06□□□□□ -1.44
VPS33A-203ENST00000536212 FGFR3P22607 806 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 RRM1P23921 792 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 KLRC2P26717 231 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 MAP2K2P36507 400 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 SKIV2L2P42285 1042 aaKnown RBP6.06□□□□□ -1.44
VPS33A-203ENST00000536212 SLCO1A2P46721 670 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 ITGA8P53708 1063 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 NCALDP61601 193 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 PPARDQ03181 441 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 CCDC15Q0P6D6 951 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 DMP1Q13316 513 aaPredicted RBP6.06□□□□□ -1.44
VPS33A-203ENST00000536212 MTMR1Q13613 665 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 MPP2Q14168 576 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 PSMD6Q15008 389 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 PGM5Q15124 567 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 DLGAP5Q15398 846 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 LONRF1Q17RB8 773 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 ZACNQ401N2 412 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 ZNF394Q53GI3 561 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 BRDTQ58F21 947 aaPredicted RBP6.06□□□□□ -1.44
VPS33A-203ENST00000536212 MEX3CQ5U5Q3 659 aaKnown RBP6.06□□□□□ -1.44
VPS33A-203ENST00000536212 MSL1Q68DK7 614 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 PLEKHA7Q6IQ23 1121 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 HIBCHQ6NVY1 386 aaPredicted RBP6.06□□□□□ -1.44
VPS33A-203ENST00000536212 DRICH1Q6PGQ1 229 aaPredicted RBP6.06□□□□□ -1.44
VPS33A-203ENST00000536212 NSMFQ6X4W1 530 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 RGS9BPQ6ZS82 235 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 JAZF1Q86VZ6 243 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 PHF13Q86YI8 300 aaPredicted RBP6.06□□□□□ -1.44
VPS33A-203ENST00000536212 TDRPQ86YL5 185 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 GALNT12Q8IXK2 581 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 KATNAL2Q8IYT4 538 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 CCDC89Q8N998 374 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 EXD1Q8NHP7 514 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 UHMK1Q8TAS1 419 aaKnown RBP6.06□□□□□ -1.44
VPS33A-203ENST00000536212 BSNDQ8WZ55 320 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 MAML1Q92585 1016 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 SAAL1Q96ER3 474 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 MAGEB18Q96M61 343 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 TAAR1Q96RJ0 339 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 PDCD2LQ9BRP1 358 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 GLIS2Q9BZE0 524 aaPredicted RBP6.06□□□□□ -1.44
VPS33A-203ENST00000536212 GSX2Q9BZM3 304 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 MAF1Q9H063 256 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 KIAA1683Q9H0B3 1180 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 CXorf56Q9H5V9 222 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 C12orf49Q9H741 205 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms