RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 VHLP40337 213 aa18.83■□□□□ 0.6
RAB40C-203ENST00000535977 PIGHQ14442 188 aaPredicted RBP18.83■□□□□ 0.6
RAB40C-203ENST00000535977 ZC3H18Q86VM9 953 aaKnown RBP18.83■□□□□ 0.6
RAB40C-203ENST00000535977 PRPF31Q8WWY3 499 aaKnown RBP18.83■□□□□ 0.6
RAB40C-203ENST00000535977 ERP27Q96DN0 273 aa18.83■□□□□ 0.6
RAB40C-203ENST00000535977 HEMGNQ9BXL5 484 aa18.83■□□□□ 0.6
RAB40C-203ENST00000535977 NIF3L1Q9GZT8 377 aa18.83■□□□□ 0.6
RAB40C-203ENST00000535977 KCNK9Q9NPC2 374 aa18.83■□□□□ 0.6
RAB40C-203ENST00000535977 DDX56Q9NY93 547 aaKnown RBP18.83■□□□□ 0.6
RAB40C-203ENST00000535977 GGA3Q9NZ52 723 aa18.83■□□□□ 0.6
RAB40C-203ENST00000535977 R3HDM2Q9Y2K5 976 aaKnown RBP18.83■□□□□ 0.6
RAB40C-203ENST00000535977 FOXO6A8MYZ6 492 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 MSCO60682 206 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 ATP6V1G1O75348 118 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 ACSL3O95573 720 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 EIF4BP23588 611 aaKnown RBP18.82■□□□□ 0.6
RAB40C-203ENST00000535977 STAT4Q14765 748 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 CNPY1Q3B7I2 92 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 DPY19L2Q6NUT2 758 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 LCA5Q86VQ0 697 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 LRRC8CQ8TDW0 803 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 ARHGEF2Q92974 986 aaKnown RBP18.82■□□□□ 0.6
RAB40C-203ENST00000535977 ACO2Q99798 780 aaKnown RBP18.82■□□□□ 0.6
RAB40C-203ENST00000535977 HERPUD2Q9BSE4 406 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 TCHPQ9BT92 498 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 FAM192AQ9GZU8 254 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 GPRC5DQ9NZD1 345 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 DRG1Q9Y295 367 aaKnown RBP18.82■□□□□ 0.6
RAB40C-203ENST00000535977 CFHP08603 1231 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 SKIP12755 728 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 CHKAP35790 457 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 LLGL1Q15334 1064 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 MAPK6Q16659 721 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 RIBC1Q8N443 379 aaPredicted RBP18.82■□□□□ 0.6
RAB40C-203ENST00000535977 PCDHGC3Q9UN70 934 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 SSC5DA1L4H1 1573 aa18.82■□□□□ 0.6
RAB40C-203ENST00000535977 ATP5HO75947 161 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 PENKP01210 267 aaPredicted RBP18.81■□□□□ 0.6
RAB40C-203ENST00000535977 CDH5P33151 784 aaPredicted RBP18.81■□□□□ 0.6
RAB40C-203ENST00000535977 TCF7P36402 384 aaPredicted RBP18.81■□□□□ 0.6
RAB40C-203ENST00000535977 TRPC3Q13507 836 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 DBN1Q16643 649 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 LONRF1Q17RB8 773 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 C2CD6Q53TS8 623 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 FAM47EQ6ZV65 393 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 GSTA5Q7RTV2 222 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 SCG3Q8WXD2 468 aaKnown RBP18.81■□□□□ 0.6
RAB40C-203ENST00000535977 DCLRE1BQ9H816 532 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 STOML1Q9UBI4 398 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 LGALS13Q9UHV8 139 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 USTQ9Y2C2 406 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 ACTL7BQ9Y614 415 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 FAM189A1O60320 539 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 USP2O75604 605 aaPredicted RBP18.81■□□□□ 0.6
RAB40C-203ENST00000535977 ABHD2P08910 425 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 ACVR2BQ13705 512 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 MPP2Q14168 576 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 LLGL2Q6P1M3 1020 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 DNAJC24Q6P3W2 148 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 NIPA2Q8N8Q9 360 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 INPP5DQ92835 1189 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 SLC7A6OSQ96CW6 309 aaPredicted RBP18.81■□□□□ 0.6
RAB40C-203ENST00000535977 VCX3BQ9H321 246 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 VCX3AQ9NNX9 186 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 STRIP2Q9ULQ0 834 aa18.81■□□□□ 0.6
RAB40C-203ENST00000535977 MAGEA13PA6NCF6 341 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 CST3P01034 146 aaPredicted RBP18.8■□□□□ 0.6
RAB40C-203ENST00000535977 KLRC2P26717 231 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 MAGEA10P43363 369 aaPredicted RBP18.8■□□□□ 0.6
RAB40C-203ENST00000535977 FSTL1Q12841 308 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 MTFR1Q15390 333 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 RASIP1Q5U651 963 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 SNX30Q5VWJ9 437 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 IZUMO3Q5VZ72 239 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 PLPPR4Q7Z2D5 763 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 ZCCHC9Q8N567 271 aaKnown RBP18.8■□□□□ 0.6
RAB40C-203ENST00000535977 TRPM4Q8TD43 1214 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 NRG4Q8WWG1 115 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 GATA6Q92908 595 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 FZD1Q9UP38 647 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 SOWAHBA6NEL2 793 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 CDH16O75309 829 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 SETDB1Q15047 1291 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 TRIP13Q15645 432 aaPredicted RBP18.8■□□□□ 0.6
RAB40C-203ENST00000535977 CCDC6Q16204 474 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 KYNUQ16719 465 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 KHDC1Q4VXA5 237 aaKnown RBP18.8■□□□□ 0.6
RAB40C-203ENST00000535977 DCUN1D2Q6PH85 259 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 SH3TC2Q8TF17 1288 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 TTC25Q96NG3 672 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 SLITRK1Q96PX8 696 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 SPATC1LQ9H0A9 340 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 NINJ2Q9NZG7 142 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 CPSF3Q9UKF6 684 aaKnown RBP18.8■□□□□ 0.6
RAB40C-203ENST00000535977 TCRBV5S1A1TA0A578 114 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 LIASO43766 372 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 EDN1P05305 212 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 PRKCBP05771 671 aa18.8■□□□□ 0.6
RAB40C-203ENST00000535977 HARSP12081 509 aaKnown RBP18.8■□□□□ 0.6
RAB40C-203ENST00000535977 CD58P19256 250 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms