RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 PLCG1P19174 1290 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 PDE6CP51160 858 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 ZNF131P52739 623 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 IRX4P78413 519 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 GTF2BQ00403 316 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 LMAN2Q12907 356 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 USP4Q13107 963 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 MCM6Q14566 821 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 TRIM61Q5EBN2 209 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 INTS6LQ5JSJ4 861 aaKnown RBP8.63□□□□□ -1.03
CHFR-211ENST00000535897 ARL6IP4Q66PJ3 421 aaKnown RBP8.63□□□□□ -1.03
CHFR-211ENST00000535897 LMBRD2Q68DH5 695 aaPredicted RBP8.63□□□□□ -1.03
CHFR-211ENST00000535897 LPCAT2Q7L5N7 544 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 PGBD3Q8N328 593 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 PDCL2Q8N4E4 241 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 MDGA1Q8NFP4 955 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 USP33Q8TEY7 942 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 KCNN1Q92952 543 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 TRMT2BQ96GJ1 504 aaKnown RBP8.63□□□□□ -1.03
CHFR-211ENST00000535897 AK8Q96MA6 479 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 ACBD6Q9BR61 282 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 FAM213AQ9BRX8 229 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 NUSAP1Q9BXS6 441 aaKnown RBP8.63□□□□□ -1.03
CHFR-211ENST00000535897 LINC00597Q9H2U6 94 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 ABCB6Q9NP58 842 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 GTF3C4Q9UKN8 822 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 L1RE1Q9UN81 338 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 AGAP1Q9UPQ3 857 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 R3HCC1Q9Y3T6 440 aaKnown RBP8.63□□□□□ -1.03
CHFR-211ENST00000535897 WDFY3Q8IZQ1 3526 aa8.63□□□□□ -1.03
CHFR-211ENST00000535897 ATXN2Q99700 1313 aaKnown RBP8.62□□□□□ -1.03
CHFR-211ENST00000535897 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 MYMKA6NI61 221 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 SRRM3A6NNA2 597 aaPredicted RBP8.62□□□□□ -1.03
CHFR-211ENST00000535897 CDX4O14627 284 aaPredicted RBP8.62□□□□□ -1.03
CHFR-211ENST00000535897 HYAL3O43820 417 aaPredicted RBP8.62□□□□□ -1.03
CHFR-211ENST00000535897 ABL1P00519 1130 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 CFIP05156 583 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 NEFLP07196 543 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 ATXN3P54252 364 aaPredicted RBP8.62□□□□□ -1.03
CHFR-211ENST00000535897 SIM1P81133 766 aaPredicted RBP8.62□□□□□ -1.03
CHFR-211ENST00000535897 ACAP1Q15027 740 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 CRY1Q16526 586 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 CCDC142Q17RM4 750 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 RASSF3Q86WH2 238 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 NT5DC4Q86YG4 428 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 TMEFF1Q8IYR6 380 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 ADGRF2Q8IZF7 708 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 TMEM86AQ8N2M4 240 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 ALLCQ8N6M5 410 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 KRI1Q8N9T8 703 aaKnown RBP8.62□□□□□ -1.03
CHFR-211ENST00000535897 WHAMMQ8TF30 809 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 CACTINQ8WUQ7 758 aaKnown RBP8.62□□□□□ -1.03
CHFR-211ENST00000535897 LEO1Q8WVC0 666 aaPredicted RBP8.62□□□□□ -1.03
CHFR-211ENST00000535897 RLN3Q8WXF3 142 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 RAD54LQ92698 747 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 SAAL1Q96ER3 474 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 MYRFLQ96LU7 910 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 GTPBP2Q9BX10 602 aaKnown RBP8.62□□□□□ -1.03
CHFR-211ENST00000535897 IKZF4Q9H2S9 585 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 POLMQ9NP87 494 aaPredicted RBP8.62□□□□□ -1.03
CHFR-211ENST00000535897 RBAKQ9NYW8 714 aaPredicted RBP8.62□□□□□ -1.03
CHFR-211ENST00000535897 MMP17Q9ULZ9 603 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 ARHGAP26Q9UNA1 814 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 LHX6Q9UPM6 363 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 SNX9Q9Y5X1 595 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 DMXL2Q8TDJ6 3036 aa8.62□□□□□ -1.03
CHFR-211ENST00000535897 ANAPC1Q9H1A4 1944 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 SPAARA0A1B0GVQ0 90 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 K7EQS6 105 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 SCAMP3O14828 347 aaKnown RBP8.61□□□□□ -1.03
CHFR-211ENST00000535897 SLC26A4O43511 780 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 HCRTO43612 131 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 SEC24BO95487 1268 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 KLF8O95600 359 aaPredicted RBP8.61□□□□□ -1.03
CHFR-211ENST00000535897 ENGP17813 658 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 ANXA13P27216 316 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 PCSK1P29120 753 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 RDXP35241 583 aaKnown RBP8.61□□□□□ -1.03
CHFR-211ENST00000535897 TIE1P35590 1138 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 DDIT3P35638 169 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 GRIK1P39086 918 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 OPRD1P41143 372 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 PTGER3P43115 390 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 LHX1P48742 406 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 CYP27A1Q02318 531 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 KDSRQ06136 332 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 POSTNQ15063 836 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 CFAP221Q4G0U5 840 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 LYSMD4Q5XG99 296 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 CRELD2Q6UXH1 353 aaPredicted RBP8.61□□□□□ -1.03
CHFR-211ENST00000535897 C4orf50Q6ZRC1 276 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 DYMQ7RTS9 669 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 FILIP1Q7Z7B0 1213 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 SFR1Q86XK3 245 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 SYCP3Q8IZU3 236 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 HDDC3Q8N4P3 179 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 CSGALNACT2Q8N6G5 542 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 LRRC52Q8N7C0 313 aa8.61□□□□□ -1.03
CHFR-211ENST00000535897 TXNDC5Q8NBS9 432 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms