RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 POLR3BQ9NW08 1133 aaPredicted RBP22.05■■□□□ 1.12
LTBR-205ENST00000535739 LAMA1P25391 3075 aa22.04■■□□□ 1.12
LTBR-205ENST00000535739 TRAV19A0A0A6YYK7 116 aa22.04■■□□□ 1.12
LTBR-205ENST00000535739 K7ELQ4 463 aaPredicted RBP22.04■■□□□ 1.12
LTBR-205ENST00000535739 RNF40O75150 1001 aa22.04■■□□□ 1.12
LTBR-205ENST00000535739 CKMP06732 381 aa22.04■■□□□ 1.12
LTBR-205ENST00000535739 PDGFRBP09619 1106 aa22.04■■□□□ 1.12
LTBR-205ENST00000535739 USP17L7P0C7H9 530 aa22.04■■□□□ 1.12
LTBR-205ENST00000535739 GJA4P35212 333 aa22.04■■□□□ 1.12
LTBR-205ENST00000535739 MAGEA11P43364 429 aa22.04■■□□□ 1.12
LTBR-205ENST00000535739 ASIC1P78348 528 aa22.04■■□□□ 1.12
LTBR-205ENST00000535739 AMPD2Q01433 879 aa22.04■■□□□ 1.12
LTBR-205ENST00000535739 ZNF77Q15935 545 aa22.04■■□□□ 1.12
LTBR-205ENST00000535739 C4orf50Q6ZRC1 276 aa22.04■■□□□ 1.12
LTBR-205ENST00000535739 PRR23CQ6ZRP0 262 aa22.04■■□□□ 1.12
LTBR-205ENST00000535739 ARL14EPQ8N8R7 260 aaPredicted RBP22.04■■□□□ 1.12
LTBR-205ENST00000535739 RDH13Q8NBN7 331 aa22.04■■□□□ 1.12
LTBR-205ENST00000535739 MYLPFQ96A32 169 aa22.04■■□□□ 1.12
LTBR-205ENST00000535739 DHX58Q96C10 678 aa22.04■■□□□ 1.12
LTBR-205ENST00000535739 DUS2Q9NX74 493 aaKnown RBP22.04■■□□□ 1.12
LTBR-205ENST00000535739 MAGEC2Q9UBF1 373 aaPredicted RBP22.04■■□□□ 1.12
LTBR-205ENST00000535739 CDH9Q9ULB4 789 aa22.04■■□□□ 1.12
LTBR-205ENST00000535739 CNOT1A5YKK6 2376 aaKnown RBP22.04■■□□□ 1.12
LTBR-205ENST00000535739 KIAA1549LQ6ZVL6 1849 aa22.03■■□□□ 1.12
LTBR-205ENST00000535739 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.03■■□□□ 1.12
LTBR-205ENST00000535739 C2orf78A6NCI8 922 aa22.03■■□□□ 1.12
LTBR-205ENST00000535739 EIF3DO15371 548 aaKnown RBP eCLIP22.03■■□□□ 1.12
LTBR-205ENST00000535739 PPP6R2O75170 966 aa22.03■■□□□ 1.12
LTBR-205ENST00000535739 BDNFP23560 247 aa22.03■■□□□ 1.12
LTBR-205ENST00000535739 USP4Q13107 963 aa22.03■■□□□ 1.12
LTBR-205ENST00000535739 CSRP2Q16527 193 aa22.03■■□□□ 1.12
LTBR-205ENST00000535739 EPM2AIP1Q7L775 607 aaPredicted RBP22.03■■□□□ 1.12
LTBR-205ENST00000535739 WDR49Q8IV35 697 aa22.03■■□□□ 1.12
LTBR-205ENST00000535739 CPA6Q8N4T0 437 aa22.03■■□□□ 1.12
LTBR-205ENST00000535739 ZNF507Q8TCN5 953 aa22.03■■□□□ 1.12
LTBR-205ENST00000535739 OSCP1Q8WVF1 389 aa22.03■■□□□ 1.12
LTBR-205ENST00000535739 MMS19Q96T76 1030 aa22.03■■□□□ 1.12
LTBR-205ENST00000535739 CUEDC2Q9H467 287 aa22.03■■□□□ 1.12
LTBR-205ENST00000535739 ECT2Q9H8V3 914 aa22.03■■□□□ 1.12
LTBR-205ENST00000535739 GCNT4Q9P109 453 aa22.03■■□□□ 1.12
LTBR-205ENST00000535739 SLC8A2Q9UPR5 921 aa22.03■■□□□ 1.12
LTBR-205ENST00000535739 WNT6Q9Y6F9 365 aa22.03■■□□□ 1.12
LTBR-205ENST00000535739 TGFB1I1O43294 461 aa22.02■■□□□ 1.12
LTBR-205ENST00000535739 ATG13O75143 517 aa22.02■■□□□ 1.12
LTBR-205ENST00000535739 DRD1P21728 446 aa22.02■■□□□ 1.12
LTBR-205ENST00000535739 WARSP23381 471 aaKnown RBP22.02■■□□□ 1.12
LTBR-205ENST00000535739 IFNAR2P48551 515 aa22.02■■□□□ 1.12
LTBR-205ENST00000535739 AMPD3Q01432 767 aa22.02■■□□□ 1.12
LTBR-205ENST00000535739 FAM26FQ5R3K3 315 aa22.02■■□□□ 1.12
LTBR-205ENST00000535739 TRAPPC11Q7Z392 1133 aa22.02■■□□□ 1.12
LTBR-205ENST00000535739 FSIP1Q8NA03 581 aa22.02■■□□□ 1.12
LTBR-205ENST00000535739 NETO1Q8TDF5 533 aa22.02■■□□□ 1.12
LTBR-205ENST00000535739 P2RY13Q9BPV8 354 aa22.02■■□□□ 1.12
LTBR-205ENST00000535739 KIAA1586Q9HCI6 787 aa22.02■■□□□ 1.12
LTBR-205ENST00000535739 AGPAT3Q9NRZ7 376 aa22.02■■□□□ 1.12
LTBR-205ENST00000535739 AXIN1O15169 862 aa22.01■■□□□ 1.11
LTBR-205ENST00000535739 CLIC2O15247 247 aa22.01■■□□□ 1.11
LTBR-205ENST00000535739 GDF9O60383 454 aa22.01■■□□□ 1.11
LTBR-205ENST00000535739 CST3P01034 146 aaPredicted RBP22.01■■□□□ 1.11
LTBR-205ENST00000535739 DLATP10515 647 aaKnown RBP22.01■■□□□ 1.11
LTBR-205ENST00000535739 HDCP19113 662 aa22.01■■□□□ 1.11
LTBR-205ENST00000535739 GRIK1P39086 918 aa22.01■■□□□ 1.11
LTBR-205ENST00000535739 USP46P62068 366 aa22.01■■□□□ 1.11
LTBR-205ENST00000535739 CYP27A1Q02318 531 aa22.01■■□□□ 1.11
LTBR-205ENST00000535739 SNRNP35Q16560 246 aaKnown RBP22.01■■□□□ 1.11
LTBR-205ENST00000535739 EML3Q32P44 896 aa22.01■■□□□ 1.11
LTBR-205ENST00000535739 FOXD4L5Q5VV16 416 aaPredicted RBP22.01■■□□□ 1.11
LTBR-205ENST00000535739 SHC4Q6S5L8 630 aa22.01■■□□□ 1.11
LTBR-205ENST00000535739 VSTM1Q6UX27 236 aa22.01■■□□□ 1.11
LTBR-205ENST00000535739 NELFCDQ8IXH7 590 aa22.01■■□□□ 1.11
LTBR-205ENST00000535739 IQUBQ8NA54 791 aa22.01■■□□□ 1.11
LTBR-205ENST00000535739 SH3RF2Q8TEC5 729 aa22.01■■□□□ 1.11
LTBR-205ENST00000535739 GAB3Q8WWW8 586 aa22.01■■□□□ 1.11
LTBR-205ENST00000535739 FOXD4L4Q8WXT5 416 aaPredicted RBP22.01■■□□□ 1.11
LTBR-205ENST00000535739 SPATA17Q96L03 361 aa22.01■■□□□ 1.11
LTBR-205ENST00000535739 ZNF396Q96N95 335 aaPredicted RBP22.01■■□□□ 1.11
LTBR-205ENST00000535739 MRPL45Q9BRJ2 306 aaKnown RBP22.01■■□□□ 1.11
LTBR-205ENST00000535739 MYOFQ9NZM1 2061 aa22.01■■□□□ 1.11
LTBR-205ENST00000535739 ACACBO00763 2458 aa22■■□□□ 1.11
LTBR-205ENST00000535739 SLC30A4O14863 429 aa22■■□□□ 1.11
LTBR-205ENST00000535739 CUTAO60888 179 aa22■■□□□ 1.11
LTBR-205ENST00000535739 RPP40O75818 363 aaKnown RBP22■■□□□ 1.11
LTBR-205ENST00000535739 TNNI1P19237 187 aa22■■□□□ 1.11
LTBR-205ENST00000535739 CASP1P29466 404 aa22■■□□□ 1.11
LTBR-205ENST00000535739 CYP2J2P51589 502 aa22■■□□□ 1.11
LTBR-205ENST00000535739 KCNB1Q14721 858 aa22■■□□□ 1.11
LTBR-205ENST00000535739 MAPRE1Q15691 268 aaKnown RBP22■■□□□ 1.11
LTBR-205ENST00000535739 CNNM4Q6P4Q7 775 aa22■■□□□ 1.11
LTBR-205ENST00000535739 KBTBD6Q86V97 674 aa22■■□□□ 1.11
LTBR-205ENST00000535739 EZH1Q92800 747 aaPredicted RBP22■■□□□ 1.11
LTBR-205ENST00000535739 ATP2A3Q93084 1043 aa22■■□□□ 1.11
LTBR-205ENST00000535739 PCED1BQ96HM7 432 aa22■■□□□ 1.11
LTBR-205ENST00000535739 C7orf25Q9BPX7 421 aa22■■□□□ 1.11
LTBR-205ENST00000535739 LINC00597Q9H2U6 94 aa22■■□□□ 1.11
LTBR-205ENST00000535739 NME7Q9Y5B8 376 aa22■■□□□ 1.11
LTBR-205ENST00000535739 CCDC163A0A0D9SF12 145 aa21.99■■□□□ 1.11
LTBR-205ENST00000535739 YEATS4O95619 227 aa21.99■■□□□ 1.11
LTBR-205ENST00000535739 CCDC192P0DO97 292 aa21.99■■□□□ 1.11
LTBR-205ENST00000535739 GNL1P36915 607 aaPredicted RBP21.99■■□□□ 1.11
LTBR-205ENST00000535739 CYP24A1Q07973 514 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms