RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 PDZD7Q9H5P4 517 aa8.18□□□□□ -1.1
CPSF7-214ENST00000535222 TMEM206Q9H813 350 aa8.18□□□□□ -1.1
CPSF7-214ENST00000535222 HCN2Q9UL51 889 aa8.18□□□□□ -1.1
CPSF7-214ENST00000535222 PCDHB8Q9UN66 801 aa8.18□□□□□ -1.1
CPSF7-214ENST00000535222 STARD13Q9Y3M8 1113 aa8.18□□□□□ -1.1
CPSF7-214ENST00000535222 SNX11Q9Y5W9 270 aa8.18□□□□□ -1.1
CPSF7-214ENST00000535222 ZNF638Q14966 1978 aaKnown RBP8.18□□□□□ -1.1
CPSF7-214ENST00000535222 SVILO95425 2214 aa8.18□□□□□ -1.1
CPSF7-214ENST00000535222 A0A1B0GVT2 93 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 MYMKA6NI61 221 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 TTLL13PA6NNM8 815 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 N4BP3O15049 544 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 LDOC1O95751 146 aaPredicted RBP8.17□□□□□ -1.1
CPSF7-214ENST00000535222 CALM1P0DP23 149 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 CALM2P0DP24 149 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 CALM3P0DP25 149 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 HMGA1P17096 107 aaKnown RBP8.17□□□□□ -1.1
CPSF7-214ENST00000535222 ATF6P18850 670 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 SDSP20132 328 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 QARSP47897 775 aaKnown RBP8.17□□□□□ -1.1
CPSF7-214ENST00000535222 SLC6A11P48066 632 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 CD97P48960 835 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 TUFMP49411 452 aaKnown RBP8.17□□□□□ -1.1
CPSF7-214ENST00000535222 CSNK1EP49674 416 aaKnown RBP8.17□□□□□ -1.1
CPSF7-214ENST00000535222 AFF3P51826 1226 aaKnown RBP8.17□□□□□ -1.1
CPSF7-214ENST00000535222 INSM1Q01101 510 aaPredicted RBP8.17□□□□□ -1.1
CPSF7-214ENST00000535222 DNAJC3Q13217 504 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 GLRA4Q5JXX5 417 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 JAKMIP3Q5VZ66 844 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 CDCA2Q69YH5 1023 aaPredicted RBP8.17□□□□□ -1.1
CPSF7-214ENST00000535222 TXNDC8Q6A555 127 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 CCDC81Q6ZN84 652 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 C4orf19Q8IY42 314 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 TMTC2Q8N394 836 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 TTC9BQ8N6N2 239 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 ASAP3Q8TDY4 903 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 FAM20AQ96MK3 541 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 YTHDC1Q96MU7 727 aaKnown RBP8.17□□□□□ -1.1
CPSF7-214ENST00000535222 ACAP3Q96P50 834 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 PGLYRP2Q96PD5 576 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 SLC25A18Q9H1K4 315 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 SLC38A7Q9NVC3 462 aa8.17□□□□□ -1.1
CPSF7-214ENST00000535222 PRMT7Q9NVM4 692 aaPredicted RBP8.17□□□□□ -1.1
CPSF7-214ENST00000535222 USP36Q9P275 1121 aaKnown RBP8.17□□□□□ -1.1
CPSF7-214ENST00000535222 WRAP73Q9P2S5 460 aaPredicted RBP8.17□□□□□ -1.1
CPSF7-214ENST00000535222 H0Y8X5 98 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 ADAMTS3O15072 1205 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 DKC1O60832 514 aaKnown RBP eCLIP8.16□□□□□ -1.1
CPSF7-214ENST00000535222 PPFIA2O75334 1257 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 LARGE1O95461 756 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 IGLV3-19P01714 112 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 APODP05090 189 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 OR4Q2P0C623 313 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 NCAM1P13591 858 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 GLRA2P23416 452 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 CASRP41180 1078 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 CTSKP43235 329 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 AARSP49588 968 aaKnown RBP eCLIP8.16□□□□□ -1.1
CPSF7-214ENST00000535222 YWHAHQ04917 246 aaPredicted RBP8.16□□□□□ -1.1
CPSF7-214ENST00000535222 Q4G0T1 1027 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 DCAF12L1Q5VU92 463 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 NFXL1Q6ZNB6 911 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 NOSTRINQ8IVI9 506 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 CCDC168Q8NDH2 2452 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 CCDC97Q96F63 343 aaPredicted RBP8.16□□□□□ -1.1
CPSF7-214ENST00000535222 CNDP2Q96KP4 475 aaKnown RBP8.16□□□□□ -1.1
CPSF7-214ENST00000535222 MRGPRX1Q96LB2 322 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 MMS19Q96T76 1030 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 MTRQ99707 1265 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 GABRG3Q99928 467 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 ZMYND12Q9H0C1 365 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 PCED1AQ9H1Q7 454 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 POLR1BQ9H9Y6 1135 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 CD93Q9NPY3 652 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 ITM2CQ9NQX7 267 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 THSD1Q9NS62 852 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 ADAMTS1Q9UHI8 967 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 ANKRD6Q9Y2G4 727 aa8.16□□□□□ -1.1
CPSF7-214ENST00000535222 HIVEP3Q5T1R4 2406 aa8.15□□□□□ -1.1
CPSF7-214ENST00000535222 A0A1B0GTQ1 180 aa8.15□□□□□ -1.1
CPSF7-214ENST00000535222 MEI4A8MW99 385 aa8.15□□□□□ -1.1
CPSF7-214ENST00000535222 LZTS3O60299 673 aaPredicted RBP8.15□□□□□ -1.1
CPSF7-214ENST00000535222 SOAT2O75908 522 aa8.15□□□□□ -1.1
CPSF7-214ENST00000535222 HOXB2P14652 356 aa8.15□□□□□ -1.1
CPSF7-214ENST00000535222 KCNE1P15382 129 aa8.15□□□□□ -1.1
CPSF7-214ENST00000535222 DCTP40126 519 aa8.15□□□□□ -1.1
CPSF7-214ENST00000535222 GRIA4P48058 902 aa8.15□□□□□ -1.1
CPSF7-214ENST00000535222 PDE1AP54750 535 aa8.15□□□□□ -1.1
CPSF7-214ENST00000535222 CDCP2Q5VXM1 449 aa8.15□□□□□ -1.1
CPSF7-214ENST00000535222 OTUD6AQ7L8S5 288 aa8.15□□□□□ -1.1
CPSF7-214ENST00000535222 MB21D2Q8IYB1 491 aaPredicted RBP8.15□□□□□ -1.1
CPSF7-214ENST00000535222 CCDC82Q8N4S0 544 aa8.15□□□□□ -1.1
CPSF7-214ENST00000535222 FANCBQ8NB91 859 aa8.15□□□□□ -1.1
CPSF7-214ENST00000535222 NCOA7Q8NI08 942 aa8.15□□□□□ -1.1
CPSF7-214ENST00000535222 IPO4Q8TEX9 1081 aaKnown RBP8.15□□□□□ -1.1
CPSF7-214ENST00000535222 LRRC15Q8TF66 581 aa8.15□□□□□ -1.1
CPSF7-214ENST00000535222 GJA10Q969M2 543 aa8.15□□□□□ -1.1
CPSF7-214ENST00000535222 TOE1Q96GM8 510 aaKnown RBP8.15□□□□□ -1.1
CPSF7-214ENST00000535222 VCPIP1Q96JH7 1222 aa8.15□□□□□ -1.1
CPSF7-214ENST00000535222 ZMAT2Q96NC0 199 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms