RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 PDE5AO76074 875 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 SMIM18P0DKX4 95 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 RPL5P46777 297 aaKnown RBP20.07■□□□□ 0.8
SMPD1-210ENST00000534405 SOX10P56693 466 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 XKR9Q5GH70 373 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 PASD1Q8IV76 773 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 SHC3Q92529 594 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 PDGFDQ9GZP0 370 aaPredicted RBP20.07■□□□□ 0.8
SMPD1-210ENST00000534405 TBC1D22BQ9NU19 505 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 UTP6Q9NYH9 597 aaKnown RBP20.07■□□□□ 0.8
SMPD1-210ENST00000534405 KANSL3Q9P2N6 904 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 GRID1Q9ULK0 1009 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 TDRKHQ9Y2W6 561 aaKnown RBP20.07■□□□□ 0.8
SMPD1-210ENST00000534405 TELO2Q9Y4R8 837 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 ZNFX1Q9P2E3 1918 aaKnown RBP20.07■□□□□ 0.8
SMPD1-210ENST00000534405 RASA4BC9J798 803 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 RASA4O43374 803 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 SERPINB7O75635 380 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 HDAC4P56524 1084 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 KRT72Q14CN4 511 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 PLEKHG4Q58EX7 1191 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 FYB2Q5VWT5 728 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 ADGRG6Q86SQ4 1221 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 UBL4BQ8N7F7 174 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 TMEM161BQ8NDZ6 487 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 HELQQ8TDG4 1101 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 VTI1AQ96AJ9 217 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 HSPBAP1Q96EW2 488 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 FAM84AQ96KN4 292 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 KIAA1522Q9P206 1035 aaPredicted RBP20.07■□□□□ 0.8
SMPD1-210ENST00000534405 TBX20Q9UMR3 447 aa20.07■□□□□ 0.8
SMPD1-210ENST00000534405 CFAP69A5D8W1 941 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 PMM2O15305 246 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 RARBP10826 455 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 PGM1P36871 562 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 COILP38432 576 aaPredicted RBP20.06■□□□□ 0.8
SMPD1-210ENST00000534405 HALP42357 657 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 BCL2A1Q16548 175 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 ANO5Q75V66 913 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 TTLL6Q8N841 843 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 MTMR14Q8NCE2 650 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 BSNDQ8WZ55 320 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 ZBED3Q96IU2 234 aaPredicted RBP20.06■□□□□ 0.8
SMPD1-210ENST00000534405 GPAMQ9HCL2 828 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 SPDYE16A6NNV3 312 aaPredicted RBP20.06■□□□□ 0.8
SMPD1-210ENST00000534405 NDC80O14777 642 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 DNAJC6O75061 913 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 MTA2O94776 668 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 CALCAP01258 141 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 GZMAP12544 262 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 CHKAP35790 457 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 NPTX2P47972 431 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 CHN2P52757 468 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 PSMC5P62195 406 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 MAP7D1Q3KQU3 841 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 HSP90AA5PQ58FG0 334 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 SLC39A4Q6P5W5 647 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 RASSF3Q86WH2 238 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 CEP70Q8NHQ1 597 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 MAML1Q92585 1016 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 DHX38Q92620 1227 aaKnown RBP20.06■□□□□ 0.8
SMPD1-210ENST00000534405 NUP85Q9BW27 656 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 NPHS2Q9NP85 383 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.06■□□□□ 0.8
SMPD1-210ENST00000534405 FER1L6Q2WGJ9 1857 aa20.06■□□□□ 0.8
SMPD1-210ENST00000534405 MCCD1P59942 119 aaPredicted RBP20.05■□□□□ 0.8
SMPD1-210ENST00000534405 TRMT5Q32P41 509 aaKnown RBP20.05■□□□□ 0.8
SMPD1-210ENST00000534405 CROCCP3Q8IVE0 287 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 RTKN2Q8IZC4 609 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 TAS1R2Q8TE23 839 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 PDCD2LQ9BRP1 358 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 SSX2IPQ9Y2D8 614 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 CYP11B1P15538 503 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 CETN2P41208 172 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 XIAPP98170 497 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 NR1H3Q13133 447 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 TMCO4Q5TGY1 634 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 UGT2A3Q6UWM9 527 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 NSMFQ6X4W1 530 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 RAPH1Q70E73 1250 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 LRRC6Q86X45 466 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 MAP4K3Q8IVH8 894 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 CCDC105Q8IYK2 499 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 ZNF564Q8TBZ8 553 aaPredicted RBP20.05■□□□□ 0.8
SMPD1-210ENST00000534405 WNK4Q96J92 1243 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 SNX27Q96L92 541 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 RMDN3Q96TC7 470 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 DMTF1Q9Y222 760 aa20.05■□□□□ 0.8
SMPD1-210ENST00000534405 TESPA1A2RU30 521 aaPredicted RBP20.04■□□□□ 0.8
SMPD1-210ENST00000534405 THAP12O43422 761 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 PGM3O95394 542 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 TFAP2AP05549 437 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 ACTR3P61158 418 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 KRT39Q6A163 491 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 ARPC5LQ9BPX5 153 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 NACA2Q9H009 215 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 NINJ2Q9NZG7 142 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 COQ4Q9Y3A0 265 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 DENND3A2RUS2 1198 aa20.04■□□□□ 0.8
SMPD1-210ENST00000534405 CBFA2T3O75081 653 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms