RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 DENND5BQ6ZUT9 1274 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 SYNPOQ8N3V7 929 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 TTC16Q8NEE8 873 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 GOLGA5Q8TBA6 731 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 MYCBPAPQ8TBZ2 947 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 PCED1BQ96HM7 432 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 SPATA17Q96L03 361 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 SLC22A12Q96S37 553 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 GZF1Q9H116 711 aaPredicted RBP9.52□□□□□ -0.89
COPB1-211ENST00000534234 EPC1Q9H2F5 836 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 HPS4Q9NQG7 708 aa9.52□□□□□ -0.89
COPB1-211ENST00000534234 NXF1Q9UBU9 619 aaKnown RBP9.52□□□□□ -0.89
COPB1-211ENST00000534234 TRAV19A0A0A6YYK7 116 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 OTOL1A6NHN0 477 aaPredicted RBP9.51□□□□□ -0.89
COPB1-211ENST00000534234 TADA3O75528 432 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 CKMP06732 381 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 PFKFB1P16118 471 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 PTPN1P18031 435 aaKnown RBP9.51□□□□□ -0.89
COPB1-211ENST00000534234 HDCP19113 662 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 ANXA13P27216 316 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 ATICP31939 592 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 CASP4P49662 377 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 MYL6P60660 151 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 FOXK2Q01167 660 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 AMPD2Q01433 879 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 FAM160A1Q05DH4 1040 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 KMT5BQ4FZB7 885 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 MDH1BQ5I0G3 518 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 ARL14EPQ8N8R7 260 aaPredicted RBP9.51□□□□□ -0.89
COPB1-211ENST00000534234 RIN3Q8TB24 985 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 PARD3BQ8TEW8 1205 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 SECISBP2LQ93073 1101 aaKnown RBP9.51□□□□□ -0.89
COPB1-211ENST00000534234 SPATA32Q96LK8 384 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 CEP295NLQ96MC4 621 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 XYLT2Q9H1B5 865 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 EXOC1Q9NV70 894 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 SMG5Q9UPR3 1016 aaKnown RBP9.51□□□□□ -0.89
COPB1-211ENST00000534234 SSUH2Q9Y2M2 353 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 NME7Q9Y5B8 376 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 SCN1AP35498 2009 aa9.51□□□□□ -0.89
COPB1-211ENST00000534234 C2orf78A6NCI8 922 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 A8MXQ7 604 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 CHURC1-FNTBB4DL54 471 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 F8VP50 259 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 PDXKO00764 312 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 TRDMT1O14717 391 aaKnown RBP9.5□□□□□ -0.89
COPB1-211ENST00000534234 STAU1O95793 577 aaKnown RBP9.5□□□□□ -0.89
COPB1-211ENST00000534234 ARSAP15289 507 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 FNTBP49356 437 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 GALK1P51570 392 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 AP3M2P53677 418 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 USP46P62068 366 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 KRT85P78386 507 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 GRSF1Q12849 480 aaKnown RBP eCLIP9.5□□□□□ -0.89
COPB1-211ENST00000534234 BIRC3Q13489 604 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 KCNB1Q14721 858 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 MTF1Q14872 753 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 PDGFRLQ15198 375 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 TMEM196Q5HYL7 178 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 KIAA0895Q8NCT3 520 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 PLEKHO2Q8TD55 490 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 SYAP1Q96A49 352 aaPredicted RBP9.5□□□□□ -0.89
COPB1-211ENST00000534234 RMDN1Q96DB5 314 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 CHAMP1Q96JM3 812 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 C8orf48Q96LL4 319 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 DMAC2Q9NW81 257 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 C2orf42Q9NWW7 574 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 DUS2Q9NX74 493 aaKnown RBP9.5□□□□□ -0.89
COPB1-211ENST00000534234 EHD2Q9NZN4 543 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 TRPM5Q9NZQ8 1165 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 GCNT4Q9P109 453 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 USP25Q9UHP3 1055 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 RAB23Q9ULC3 237 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 ZDHHC9Q9Y397 364 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 CFAP54Q96N23 3096 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 CACNA1IQ9P0X4 2223 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 VPS13AQ96RL7 3174 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 FAM186AA6NE01 2351 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 LRRIQ3A6PVS8 624 aaPredicted RBP9.5□□□□□ -0.89
COPB1-211ENST00000534234 K7ESF4 209 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 TRIM66O15016 1216 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 HRO43593 1189 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 CLSTN1O94985 981 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 PAPSS2O95340 614 aaPredicted RBP9.5□□□□□ -0.89
COPB1-211ENST00000534234 C4BPAP04003 597 aaKnown RBP9.5□□□□□ -0.89
COPB1-211ENST00000534234 MYL1P05976 194 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 GJA4P35212 333 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 SYKP43405 635 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 CDH8P55286 799 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 CLDN10P78369 228 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 DMWDQ09019 674 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 EP300Q09472 2414 aaPredicted RBP9.5□□□□□ -0.89
COPB1-211ENST00000534234 ZNF77Q15935 545 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 LPAL2Q16609 132 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 TDRD10Q5VZ19 366 aaKnown RBP9.5□□□□□ -0.89
COPB1-211ENST00000534234 HEATR6Q6AI08 1181 aaKnown RBP9.5□□□□□ -0.89
COPB1-211ENST00000534234 FSTL4Q6MZW2 842 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 ERMP1Q7Z2K6 904 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 GVINP1Q7Z2Y8 2422 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 SLC9A9Q8IVB4 645 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms