RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 USP4Q13107 963 aa11.47□□□□□ -0.57
CSDE1-215ENST00000533818 DMP1Q13316 513 aaPredicted RBP11.47□□□□□ -0.57
CSDE1-215ENST00000533818 SH3RF2Q8TEC5 729 aa11.47□□□□□ -0.57
CSDE1-215ENST00000533818 LIN37Q96GY3 246 aaPredicted RBP11.47□□□□□ -0.57
CSDE1-215ENST00000533818 CCDC43Q96MW1 224 aaKnown RBP11.47□□□□□ -0.57
CSDE1-215ENST00000533818 C2orf40Q9H1Z8 148 aa11.47□□□□□ -0.57
CSDE1-215ENST00000533818 OSBPL3Q9H4L5 887 aa11.47□□□□□ -0.57
CSDE1-215ENST00000533818 TRPC7Q9HCX4 862 aa11.47□□□□□ -0.57
CSDE1-215ENST00000533818 GPRC5CQ9NQ84 441 aa11.47□□□□□ -0.57
CSDE1-215ENST00000533818 ARHGEF4Q9NR80 690 aa11.47□□□□□ -0.57
CSDE1-215ENST00000533818 DAXXQ9UER7 740 aaPredicted RBP11.47□□□□□ -0.57
CSDE1-215ENST00000533818 DDX25Q9UHL0 483 aaKnown RBP11.47□□□□□ -0.57
CSDE1-215ENST00000533818 MAN2B2Q9Y2E5 1009 aa11.47□□□□□ -0.57
CSDE1-215ENST00000533818 A0A1B0GVT2 93 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 GOLGA8AA7E2F4 631 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 GOLGA8BA8MQT2 603 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 CCER2I3L3R5 266 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 TRIM66O15016 1216 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 KLK10O43240 276 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 SUV39H1O43463 412 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 EDN1P05305 212 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 CKMP06732 381 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 C1SP09871 688 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 HOXB2P14652 356 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 HMGA1P17096 107 aaKnown RBP11.46□□□□□ -0.57
CSDE1-215ENST00000533818 NDUFV2P19404 249 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 CDC27P30260 824 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 WASP42768 502 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 INAVAQ3KP66 663 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 ATF7IP2Q5U623 682 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 OVOS1Q6IE37 1185 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 TRMT11Q7Z4G4 463 aaKnown RBP11.46□□□□□ -0.57
CSDE1-215ENST00000533818 DHX40Q8IX18 779 aaKnown RBP11.46□□□□□ -0.57
CSDE1-215ENST00000533818 CEP120Q8N960 986 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 EXD3Q8N9H8 876 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 ZFRQ96KR1 1074 aaKnown RBP11.46□□□□□ -0.57
CSDE1-215ENST00000533818 SLC22A12Q96S37 553 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 TMEM206Q9H813 350 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 CD93Q9NPY3 652 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 ANKEF1Q9NU02 776 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 RCAN3Q9UKA8 241 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 BRPF3Q9ULD4 1205 aa11.46□□□□□ -0.57
CSDE1-215ENST00000533818 TRAV19A0A0A6YYK7 116 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 ANO9A1A5B4 782 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 ENC1O14682 589 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 PCDHGA12O60330 932 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 USO1O60763 962 aaKnown RBP11.45□□□□□ -0.58
CSDE1-215ENST00000533818 RFPL3O75679 317 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 NCAM1P13591 858 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 CD6P30203 668 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 EIF2DP41214 584 aaKnown RBP11.45□□□□□ -0.58
CSDE1-215ENST00000533818 GRM5P41594 1212 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 CSNK1EP49674 416 aaKnown RBP11.45□□□□□ -0.58
CSDE1-215ENST00000533818 KDSRQ06136 332 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 RESTQ13127 1097 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 KIF19Q2TAC6 998 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 SLC39A12Q504Y0 691 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 HIST2H2BCQ6DN03 193 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 NCAPH2Q6IBW4 605 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 FBXL19Q6PCT2 694 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 KCNE4Q8WWG9 221 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 RUFY2Q8WXA3 655 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 ERLEC1Q96DZ1 483 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 HIC2Q96JB3 615 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 FAM20AQ96MK3 541 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 NACC1Q96RE7 527 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 C22orf23Q9BZE7 217 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 CCDC113Q9H0I3 377 aa11.45□□□□□ -0.58
CSDE1-215ENST00000533818 MAGED2Q9UNF1 606 aaPredicted RBP11.45□□□□□ -0.58
CSDE1-215ENST00000533818 ITPR2Q14571 2701 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 NBPF19A0A087WUL8 3843 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 A0A1W2PQF6 199 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 TBC1D3BA6NDS4 549 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 BTBD18B2RXH4 712 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 KCNK3O14649 394 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 SLC37A4O43826 429 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 SLITRK3O94933 977 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 CYP17A1P05093 508 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 ADD1P35611 737 aaKnown RBP11.44□□□□□ -0.58
CSDE1-215ENST00000533818 TNFSF9P41273 254 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 DNAJC3Q13217 504 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 ZC2HC1CQ53FD0 456 aaPredicted RBP11.44□□□□□ -0.58
CSDE1-215ENST00000533818 NT5DC1Q5TFE4 455 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 MOXD1Q6UVY6 613 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 DSTYKQ6XUX3 929 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 ADGRG2Q8IZP9 1017 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 KRI1Q8N9T8 703 aaKnown RBP11.44□□□□□ -0.58
CSDE1-215ENST00000533818 CCDC148Q8NFR7 591 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 CADM4Q8NFZ8 388 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 DEPTORQ8TB45 409 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 KCNV2Q8TDN2 545 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 LRRC15Q8TF66 581 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 TOE1Q96GM8 510 aaKnown RBP11.44□□□□□ -0.58
CSDE1-215ENST00000533818 ZNF578Q96N58 590 aaPredicted RBP11.44□□□□□ -0.58
CSDE1-215ENST00000533818 GPR174Q9BXC1 333 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 STARD5Q9NSY2 213 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 CNTN3Q9P232 1028 aa11.44□□□□□ -0.58
CSDE1-215ENST00000533818 EIF2B4Q9UI10 523 aaKnown RBP11.44□□□□□ -0.58
CSDE1-215ENST00000533818 RBM8AQ9Y5S9 174 aaKnown RBP11.44□□□□□ -0.58
CSDE1-215ENST00000533818 SNX11Q9Y5W9 270 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms