RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 PBXIP1Q96AQ6 731 aa18.31■□□□□ 0.52
CTSB-229ENST00000533572 ACBD6Q9BR61 282 aa18.31■□□□□ 0.52
CTSB-229ENST00000533572 SIX2Q9NPC8 291 aa18.31■□□□□ 0.52
CTSB-229ENST00000533572 AVENQ9NQS1 362 aaPredicted RBP18.31■□□□□ 0.52
CTSB-229ENST00000533572 FAM207AQ9NSI2 230 aaPredicted RBP18.31■□□□□ 0.52
CTSB-229ENST00000533572 HSFX1Q9UBD0 423 aa18.31■□□□□ 0.52
CTSB-229ENST00000533572 DNAJC12Q9UKB3 198 aa18.31■□□□□ 0.52
CTSB-229ENST00000533572 SLC27A5Q9Y2P5 690 aa18.31■□□□□ 0.52
CTSB-229ENST00000533572 LRRN2O75325 713 aa18.3■□□□□ 0.52
CTSB-229ENST00000533572 MYL4P12829 197 aa18.3■□□□□ 0.52
CTSB-229ENST00000533572 MRE11P49959 708 aa18.3■□□□□ 0.52
CTSB-229ENST00000533572 MAPRE1Q15691 268 aaKnown RBP18.3■□□□□ 0.52
CTSB-229ENST00000533572 TAF12Q16514 161 aa18.3■□□□□ 0.52
CTSB-229ENST00000533572 NFE2Q16621 373 aaPredicted RBP18.3■□□□□ 0.52
CTSB-229ENST00000533572 SCARA5Q6ZMJ2 495 aa18.3■□□□□ 0.52
CTSB-229ENST00000533572 RRAGAQ7L523 313 aa18.3■□□□□ 0.52
CTSB-229ENST00000533572 CACNA2D4Q7Z3S7 1137 aa18.3■□□□□ 0.52
CTSB-229ENST00000533572 ITIH5Q86UX2 942 aa18.3■□□□□ 0.52
CTSB-229ENST00000533572 SUGP1Q8IWZ8 645 aaKnown RBP18.3■□□□□ 0.52
CTSB-229ENST00000533572 NPAS3Q8IXF0 933 aa18.3■□□□□ 0.52
CTSB-229ENST00000533572 OR6B3Q8NGW1 331 aa18.3■□□□□ 0.52
CTSB-229ENST00000533572 RTP3Q9BQQ7 232 aa18.3■□□□□ 0.52
CTSB-229ENST00000533572 STK33Q9BYT3 514 aa18.3■□□□□ 0.52
CTSB-229ENST00000533572 GRPEL1Q9HAV7 217 aa18.3■□□□□ 0.52
CTSB-229ENST00000533572 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.3■□□□□ 0.527e-9■■■■■ 48.8
CTSB-229ENST00000533572 CISHQ9NSE2 258 aa18.3■□□□□ 0.52
CTSB-229ENST00000533572 ABI2Q9NYB9 513 aaPredicted RBP18.3■□□□□ 0.52
CTSB-229ENST00000533572 CEP72Q9P209 647 aa18.3■□□□□ 0.52
CTSB-229ENST00000533572 FBXL21Q9UKT6 434 aa18.3■□□□□ 0.52
CTSB-229ENST00000533572 CDH9Q9ULB4 789 aa18.3■□□□□ 0.52
CTSB-229ENST00000533572 MYO6Q9UM54 1294 aa18.3■□□□□ 0.52
CTSB-229ENST00000533572 ASB3Q9Y575 518 aa18.3■□□□□ 0.52
CTSB-229ENST00000533572 A8MXQ7 604 aa18.29■□□□□ 0.52
CTSB-229ENST00000533572 VNN2O95498 520 aa18.29■□□□□ 0.52
CTSB-229ENST00000533572 TPM1P09493 284 aa18.29■□□□□ 0.52
CTSB-229ENST00000533572 GSE1Q14687 1217 aa18.29■□□□□ 0.52
CTSB-229ENST00000533572 SPECC1LQ69YQ0 1117 aa18.29■□□□□ 0.52
CTSB-229ENST00000533572 DPY19L2P1Q6NXN4 242 aa18.29■□□□□ 0.52
CTSB-229ENST00000533572 HFE2Q6ZVN8 426 aa18.29■□□□□ 0.52
CTSB-229ENST00000533572 ARHGEF19Q8IW93 802 aa18.29■□□□□ 0.52
CTSB-229ENST00000533572 ZNF397Q8NF99 534 aaPredicted RBP18.29■□□□□ 0.52
CTSB-229ENST00000533572 KBTBD7Q8WVZ9 684 aa18.29■□□□□ 0.52
CTSB-229ENST00000533572 SPAG5Q96R06 1193 aa18.29■□□□□ 0.52
CTSB-229ENST00000533572 MRPL45Q9BRJ2 306 aaKnown RBP18.29■□□□□ 0.52
CTSB-229ENST00000533572 NT5C1AQ9BXI3 368 aa18.29■□□□□ 0.52
CTSB-229ENST00000533572 NUCKS1Q9H1E3 243 aaKnown RBP18.29■□□□□ 0.52
CTSB-229ENST00000533572 GANQ9H2C0 597 aa18.29■□□□□ 0.52
CTSB-229ENST00000533572 SMYD3Q9H7B4 428 aa18.29■□□□□ 0.52
CTSB-229ENST00000533572 GDE1Q9NZC3 331 aa18.29■□□□□ 0.52
CTSB-229ENST00000533572 KIAA1257Q9ULG3 409 aa18.29■□□□□ 0.52
CTSB-229ENST00000533572 DUSP12Q9UNI6 340 aa18.29■□□□□ 0.52
CTSB-229ENST00000533572 PCDHB5Q9Y5E4 795 aa18.29■□□□□ 0.52
CTSB-229ENST00000533572 A0A1W2PQJ5 194 aa18.28■□□□□ 0.52
CTSB-229ENST00000533572 CILPO75339 1184 aa18.28■□□□□ 0.52
CTSB-229ENST00000533572 CCDC172P0C7W6 258 aa18.28■□□□□ 0.52
CTSB-229ENST00000533572 CEBPBP17676 345 aa18.28■□□□□ 0.52
CTSB-229ENST00000533572 ACAT1P24752 427 aaKnown RBP18.28■□□□□ 0.52
CTSB-229ENST00000533572 ZNF75DP51815 510 aa18.28■□□□□ 0.52
CTSB-229ENST00000533572 CDH8P55286 799 aa18.28■□□□□ 0.52
CTSB-229ENST00000533572 POLR2FP61218 127 aaKnown RBP18.28■□□□□ 0.52
CTSB-229ENST00000533572 HTR4Q13639 388 aa18.28■□□□□ 0.52
CTSB-229ENST00000533572 SLC5A9Q2M3M2 681 aa18.28■□□□□ 0.52
CTSB-229ENST00000533572 INTS6LQ5JSJ4 861 aaKnown RBP18.28■□□□□ 0.52
CTSB-229ENST00000533572 BMP8AQ7Z5Y6 402 aa18.28■□□□□ 0.52
CTSB-229ENST00000533572 VSTM4Q8IW00 320 aa18.28■□□□□ 0.52
CTSB-229ENST00000533572 RSAD2Q8WXG1 361 aa18.28■□□□□ 0.52
CTSB-229ENST00000533572 SHC3Q92529 594 aa18.28■□□□□ 0.52
CTSB-229ENST00000533572 ANP32BQ92688 251 aaKnown RBP18.28■□□□□ 0.52
CTSB-229ENST00000533572 MCRS1Q96EZ8 462 aa18.28■□□□□ 0.52
CTSB-229ENST00000533572 NAA15Q9BXJ9 866 aaKnown RBP18.28■□□□□ 0.52
CTSB-229ENST00000533572 SDCBP2Q9H190 292 aa18.28■□□□□ 0.52
CTSB-229ENST00000533572 CRISPLD1Q9H336 500 aa18.28■□□□□ 0.52
CTSB-229ENST00000533572 MFSD1Q9H3U5 465 aa18.28■□□□□ 0.52
CTSB-229ENST00000533572 SMOC2Q9H3U7 446 aa18.28■□□□□ 0.52
CTSB-229ENST00000533572 CNTN6Q9UQ52 1028 aa18.28■□□□□ 0.52
CTSB-229ENST00000533572 NUMBLQ9Y6R0 609 aa18.28■□□□□ 0.52
CTSB-229ENST00000533572 ANHXE9PGG2 379 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 SOAT2O75908 522 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 NOL4O94818 638 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 PAEPP09466 180 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 CD58P19256 250 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 CDR1P51861 262 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 NDST1P52848 882 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 BPIFB4P59827 614 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 RAPGEF1Q13905 1077 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 ARHGAP44Q17R89 818 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.27■□□□□ 0.52
CTSB-229ENST00000533572 LRRTM3Q86VH5 581 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 OSTM1Q86WC4 334 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 HS6ST3Q8IZP7 471 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 CRYBG2Q8N1P7 616 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 SLC44A3Q8N4M1 653 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 TTC9BQ8N6N2 239 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 UBR7Q8N806 425 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 ASIC4Q96FT7 647 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 KREMEN1Q96MU8 473 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 GCNAQ96QF7 691 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 SLITRK6Q9H5Y7 841 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 PCDHB4Q9Y5E5 795 aa18.27■□□□□ 0.52
CTSB-229ENST00000533572 FHOD1Q9Y613 1164 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms