RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 WDR72Q3MJ13 1102 aa13.27□□□□□ -0.29
CAPRIN1-213ENST00000533562 TXNDC11Q6PKC3 985 aa13.27□□□□□ -0.29
CAPRIN1-213ENST00000533562 GPR161Q8N6U8 529 aaKnown RBP13.27□□□□□ -0.29
CAPRIN1-213ENST00000533562 EXOC4Q96A65 974 aa13.27□□□□□ -0.29
CAPRIN1-213ENST00000533562 SPATA17Q96L03 361 aa13.27□□□□□ -0.29
CAPRIN1-213ENST00000533562 CGRRF1Q99675 332 aa13.27□□□□□ -0.29
CAPRIN1-213ENST00000533562 RAB23Q9ULC3 237 aa13.27□□□□□ -0.29
CAPRIN1-213ENST00000533562 CCL26Q9Y258 94 aa13.27□□□□□ -0.29
CAPRIN1-213ENST00000533562 CACNA1AO00555 2505 aa13.27□□□□□ -0.29
CAPRIN1-213ENST00000533562 TRAV19A0A0A6YYK7 116 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 HCRTO43612 131 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 PHACTR2O75167 634 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 MYL1P05976 194 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 USP17L7P0C7H9 530 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 TDGF1P13385 188 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 BDNFP23560 247 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 CMA1P23946 247 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 ANXA13P27216 316 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 ATICP31939 592 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 PDE6CP51160 858 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 AP3M2P53677 418 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 PSMC1P62191 440 aaKnown RBP13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 CYP27A1Q02318 531 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 FAM160A1Q05DH4 1040 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 GRSF1Q12849 480 aaKnown RBP eCLIP13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 ZNF638Q14966 1978 aaKnown RBP13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 PDGFRLQ15198 375 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 ERMP1Q7Z2K6 904 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 DCLK2Q8N568 766 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 STKLD1Q8NE28 680 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 OR6B3Q8NGW1 331 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 MYCBPAPQ8TBZ2 947 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 PAGE5Q96GU1 130 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 EBF3Q9H4W6 596 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 TRPC7Q9HCX4 862 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 RBM12Q9NTZ6 932 aaKnown RBP13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 EXOC1Q9NV70 894 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 USP25Q9UHP3 1055 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 SERTAD1Q9UHV2 236 aa13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 SMG5Q9UPR3 1016 aaKnown RBP13.26□□□□□ -0.29
CAPRIN1-213ENST00000533562 TRIM66O15016 1216 aa13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 PAPSS2O95340 614 aaPredicted RBP13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 STAU1O95793 577 aaKnown RBP13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 CKMP06732 381 aa13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 HDCP19113 662 aa13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 CNR2P34972 360 aa13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 PPP3CCP48454 512 aa13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 SATB1Q01826 763 aa13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 CCINQ13939 588 aa13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 GAS6Q14393 721 aa13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 DENND5BQ6ZUT9 1274 aa13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 GRAMD1CQ8IYS0 662 aa13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 ZNF516Q92618 1163 aa13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 MYLPFQ96A32 169 aa13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 SYAP1Q96A49 352 aaPredicted RBP13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 PCED1BQ96HM7 432 aa13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 CYP2S1Q96SQ9 504 aa13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 MRPL45Q9BRJ2 306 aaKnown RBP13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 CRTAC1Q9NQ79 661 aa13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 TRPM5Q9NZQ8 1165 aa13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 DNAH14Q0VDD8 3507 aa13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 DENND4CQ5VZ89 1909 aa13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 COL4A2P08572 1712 aa13.25□□□□□ -0.29
CAPRIN1-213ENST00000533562 A0A1B0GVL5 298 aa13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 TRDMT1O14717 391 aaKnown RBP13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 ACTN4O43707 911 aaKnown RBP13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 ATG13O75143 517 aa13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 TADA3O75528 432 aa13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 PFKLP17858 780 aa13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 PTPN1P18031 435 aaKnown RBP13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 MYL6P60660 151 aa13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 KRT85P78386 507 aa13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 STK4Q13043 487 aa13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 KCNB1Q14721 858 aa13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 MTF1Q14872 753 aa13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 CCDC142Q17RM4 750 aa13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 MDH1BQ5I0G3 518 aa13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 TRIM68Q6AZZ1 485 aa13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 SLC9A9Q8IVB4 645 aa13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 ARL14EPQ8N8R7 260 aaPredicted RBP13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 TMEM174Q8WUU8 243 aa13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 SPATA32Q96LK8 384 aa13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 HPS4Q9NQG7 708 aa13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 DUS2Q9NX74 493 aaKnown RBP13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 NXF1Q9UBU9 619 aaKnown RBP13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 GMEB2Q9UKD1 530 aa13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 ATP6V1DQ9Y5K8 247 aa13.24□□□□□ -0.29
CAPRIN1-213ENST00000533562 OTOL1A6NHN0 477 aaPredicted RBP13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 A8MXQ7 604 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 PDXKO00764 312 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 KLRC4O43908 158 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 CLSTN1O94985 981 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 KIF20AO95235 890 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 PFKFB1P16118 471 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 DRD1P21728 446 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 SDHBP21912 280 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 HOXA6P31267 233 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 NOP14P78316 857 aaKnown RBP13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 CLDN10P78369 228 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 NR1H3Q13133 447 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms