RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ITPRIPL2Q3MIP1 535 aa16.49■□□□□ 0.23
CPSF1-211ENST00000533492 MDH1BQ5I0G3 518 aa16.49■□□□□ 0.23
CPSF1-211ENST00000533492 TSSK4Q6SA08 328 aa16.49■□□□□ 0.23
CPSF1-211ENST00000533492 SLC9A9Q8IVB4 645 aa16.49■□□□□ 0.23
CPSF1-211ENST00000533492 PARD3BQ8TEW8 1205 aa16.49■□□□□ 0.23
CPSF1-211ENST00000533492 USP13Q92995 863 aaPredicted RBP16.49■□□□□ 0.23
CPSF1-211ENST00000533492 PCED1BQ96HM7 432 aa16.49■□□□□ 0.23
CPSF1-211ENST00000533492 HINFPQ9BQA5 517 aa16.49■□□□□ 0.23
CPSF1-211ENST00000533492 DMAC2Q9NW81 257 aa16.49■□□□□ 0.23
CPSF1-211ENST00000533492 ZSCAN32Q9NX65 697 aa16.49■□□□□ 0.23
CPSF1-211ENST00000533492 EHD2Q9NZN4 543 aa16.49■□□□□ 0.23
CPSF1-211ENST00000533492 CCL26Q9Y258 94 aa16.49■□□□□ 0.23
CPSF1-211ENST00000533492 PCDHGA2Q9Y5H1 932 aa16.49■□□□□ 0.23
CPSF1-211ENST00000533492 PATJQ8NI35 1801 aa16.49■□□□□ 0.23
CPSF1-211ENST00000533492 TRAV19A0A0A6YYK7 116 aa16.48■□□□□ 0.23
CPSF1-211ENST00000533492 TRIM66O15016 1216 aa16.48■□□□□ 0.23
CPSF1-211ENST00000533492 NR3C1P04150 777 aa16.48■□□□□ 0.23
CPSF1-211ENST00000533492 CKMP06732 381 aa16.48■□□□□ 0.23
CPSF1-211ENST00000533492 USP17L7P0C7H9 530 aa16.48■□□□□ 0.23
CPSF1-211ENST00000533492 PTPN1P18031 435 aaKnown RBP16.48■□□□□ 0.23
CPSF1-211ENST00000533492 CCR3P51677 355 aa16.48■□□□□ 0.23
CPSF1-211ENST00000533492 ZNF667Q5HYK9 610 aa16.48■□□□□ 0.23
CPSF1-211ENST00000533492 DGKKQ5KSL6 1271 aa16.48■□□□□ 0.23
CPSF1-211ENST00000533492 CEP135Q66GS9 1140 aa16.48■□□□□ 0.23
CPSF1-211ENST00000533492 MAMSTRQ6ZN01 415 aa16.48■□□□□ 0.23
CPSF1-211ENST00000533492 DENND5BQ6ZUT9 1274 aa16.48■□□□□ 0.23
CPSF1-211ENST00000533492 TTC16Q8NEE8 873 aa16.48■□□□□ 0.23
CPSF1-211ENST00000533492 CCDC34Q96HJ3 373 aa16.48■□□□□ 0.23
CPSF1-211ENST00000533492 SPATA17Q96L03 361 aa16.48■□□□□ 0.23
CPSF1-211ENST00000533492 CEP295NLQ96MC4 621 aa16.48■□□□□ 0.23
CPSF1-211ENST00000533492 FAM126AQ9BYI3 521 aaPredicted RBP16.48■□□□□ 0.23
CPSF1-211ENST00000533492 GZF1Q9H116 711 aaPredicted RBP16.48■□□□□ 0.23
CPSF1-211ENST00000533492 KCTD10Q9H3F6 313 aa16.48■□□□□ 0.23
CPSF1-211ENST00000533492 PRMT8Q9NR22 394 aaPredicted RBP16.48■□□□□ 0.23
CPSF1-211ENST00000533492 FRMD4BQ9Y2L6 1034 aa16.48■□□□□ 0.23
CPSF1-211ENST00000533492 FANCMQ8IYD8 2048 aa16.48■□□□□ 0.23
CPSF1-211ENST00000533492 COL4A2P08572 1712 aa16.48■□□□□ 0.23
CPSF1-211ENST00000533492 FAM237AA0A1B0GTK4 181 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 A0A1W2PQ27 194 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 A0A1W2PQ64 194 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 A0A1W2PQD8 194 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 LRRIQ3A6PVS8 624 aaPredicted RBP16.47■□□□□ 0.23
CPSF1-211ENST00000533492 C4BPAP04003 597 aaKnown RBP16.47■□□□□ 0.23
CPSF1-211ENST00000533492 CXCL12P48061 93 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 NRLP54845 237 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 AMPD2Q01433 879 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 FAM160A1Q05DH4 1040 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 RUNX3Q13761 415 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 NCOA4Q13772 614 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 BECN1Q14457 450 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 ZNF268Q14587 947 aaPredicted RBP16.47■□□□□ 0.23
CPSF1-211ENST00000533492 PON2Q15165 354 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 ZNF699Q32M78 642 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 TDRD10Q5VZ19 366 aaKnown RBP16.47■□□□□ 0.23
CPSF1-211ENST00000533492 TXNDC11Q6PKC3 985 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 PLEKHO2Q8TD55 490 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 TMEM174Q8WUU8 243 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 CYP2S1Q96SQ9 504 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 FAM83CQ9BQN1 747 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 XYLT2Q9H1B5 865 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 EBF3Q9H4W6 596 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 RBM12Q9NTZ6 932 aaKnown RBP16.47■□□□□ 0.23
CPSF1-211ENST00000533492 TRPM5Q9NZQ8 1165 aa16.47■□□□□ 0.23
CPSF1-211ENST00000533492 TADA3O75528 432 aa16.46■□□□□ 0.23
CPSF1-211ENST00000533492 PRR29P0C7W0 189 aa16.46■□□□□ 0.23
CPSF1-211ENST00000533492 P4HA1P13674 534 aa16.46■□□□□ 0.23
CPSF1-211ENST00000533492 HDCP19113 662 aa16.46■□□□□ 0.23
CPSF1-211ENST00000533492 PDE6CP51160 858 aa16.46■□□□□ 0.23
CPSF1-211ENST00000533492 CLDN10P78369 228 aa16.46■□□□□ 0.23
CPSF1-211ENST00000533492 KCNB1Q14721 858 aa16.46■□□□□ 0.23
CPSF1-211ENST00000533492 TRIM68Q6AZZ1 485 aa16.46■□□□□ 0.23
CPSF1-211ENST00000533492 KRBA2Q6ZNG9 492 aa16.46■□□□□ 0.23
CPSF1-211ENST00000533492 SPEM1Q8N4L4 309 aa16.46■□□□□ 0.23
CPSF1-211ENST00000533492 ARL14EPQ8N8R7 260 aaPredicted RBP16.46■□□□□ 0.23
CPSF1-211ENST00000533492 ZBTB44Q8NCP5 570 aa16.46■□□□□ 0.23
CPSF1-211ENST00000533492 B3GALNT2Q8NCR0 500 aa16.46■□□□□ 0.23
CPSF1-211ENST00000533492 RUBCNQ92622 972 aa16.46■□□□□ 0.23
CPSF1-211ENST00000533492 DPEP3Q9H4B8 488 aa16.46■□□□□ 0.23
CPSF1-211ENST00000533492 VRTNQ9H8Y1 702 aa16.46■□□□□ 0.23
CPSF1-211ENST00000533492 GDPD2Q9HCC8 539 aa16.46■□□□□ 0.23
CPSF1-211ENST00000533492 NME7Q9Y5B8 376 aa16.46■□□□□ 0.23
CPSF1-211ENST00000533492 DMDP11532 3685 aa16.46■□□□□ 0.23
CPSF1-211ENST00000533492 CFAP54Q96N23 3096 aa16.46■□□□□ 0.23
CPSF1-211ENST00000533492 EP300Q09472 2414 aaPredicted RBP16.45■□□□□ 0.22
CPSF1-211ENST00000533492 F8VP50 259 aa16.45■□□□□ 0.22
CPSF1-211ENST00000533492 RHOBTB3O94955 611 aa16.45■□□□□ 0.22
CPSF1-211ENST00000533492 ZNF202O95125 648 aa16.45■□□□□ 0.22
CPSF1-211ENST00000533492 CDH8P55286 799 aa16.45■□□□□ 0.22
CPSF1-211ENST00000533492 DLG4P78352 724 aa16.45■□□□□ 0.22
CPSF1-211ENST00000533492 DPYDQ12882 1025 aa16.45■□□□□ 0.22
CPSF1-211ENST00000533492 MTF1Q14872 753 aa16.45■□□□□ 0.22
CPSF1-211ENST00000533492 PDGFRLQ15198 375 aa16.45■□□□□ 0.22
CPSF1-211ENST00000533492 SGSM1Q2NKQ1 1148 aa16.45■□□□□ 0.22
CPSF1-211ENST00000533492 SYNPOQ8N3V7 929 aa16.45■□□□□ 0.22
CPSF1-211ENST00000533492 TMC2Q8TDI7 906 aa16.45■□□□□ 0.22
CPSF1-211ENST00000533492 C8orf48Q96LL4 319 aa16.45■□□□□ 0.22
CPSF1-211ENST00000533492 SLC22A12Q96S37 553 aa16.45■□□□□ 0.22
CPSF1-211ENST00000533492 ELOVL4Q9GZR5 314 aa16.45■□□□□ 0.22
CPSF1-211ENST00000533492 SMYD3Q9H7B4 428 aa16.45■□□□□ 0.22
CPSF1-211ENST00000533492 HPS4Q9NQG7 708 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms