RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 TFF2Q03403 129 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 IFRD2Q12894 506 aaPredicted RBP8.37□□□□□ -1.07
COMMD9-207ENST00000533308 NFE2Q16621 373 aaPredicted RBP8.37□□□□□ -1.07
COMMD9-207ENST00000533308 UVSSAQ2YD98 709 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 CFAP221Q4G0U5 840 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 SGO2Q562F6 1265 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 LIN9Q5TKA1 542 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 TAF3Q5VWG9 929 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 TPGS2Q68CL5 300 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 ARHGAP17Q68EM7 881 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 SPECC1LQ69YQ0 1117 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 TMC5Q6UXY8 1006 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 TMEM184AQ6ZMB5 413 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 CLEC20AQ6ZU45 233 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 CACNA2D4Q7Z3S7 1137 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 PPFIBP1Q86W92 1011 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 TCEAL8Q8IYN2 117 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 HS6ST3Q8IZP7 471 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 SPPL2BQ8TCT7 592 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 EPS8L1Q8TE68 723 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 DDX1Q92499 740 aaKnown RBP8.37□□□□□ -1.07
COMMD9-207ENST00000533308 CASP10Q92851 521 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 PPP2R3CQ969Q6 453 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 PABPC5Q96DU9 382 aaKnown RBP8.37□□□□□ -1.07
COMMD9-207ENST00000533308 CYFIP2Q96F07 1278 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 SMARCD1Q96GM5 515 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 MSLNLQ96KJ4 702 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 SPAG5Q96R06 1193 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 HNRNPABQ99729 332 aaKnown RBP8.37□□□□□ -1.07
COMMD9-207ENST00000533308 OXCT2Q9BYC2 517 aaPredicted RBP8.37□□□□□ -1.07
COMMD9-207ENST00000533308 UBE2ZQ9H832 354 aaPredicted RBP8.37□□□□□ -1.07
COMMD9-207ENST00000533308 ZNF334Q9HCZ1 680 aaPredicted RBP8.37□□□□□ -1.07
COMMD9-207ENST00000533308 TJP2Q9UDY2 1190 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 CYTH4Q9UIA0 394 aa8.37□□□□□ -1.07
COMMD9-207ENST00000533308 NOCTQ9UK39 431 aaKnown RBP8.37□□□□□ -1.07
COMMD9-207ENST00000533308 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.37□□□□□ -1.07
COMMD9-207ENST00000533308 COL6A3P12111 3177 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 CCDC195A0A1B0GUA6 201 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 GOLGA6L3A6NEY3 463 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 SPDYE4A6NLX3 237 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 HHLA1C9JL84 531 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 TADA3O75528 432 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 GABBR2O75899 941 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 LRG1P02750 347 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 TPM3P06753 285 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 MMEP08473 750 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 PLEKP08567 350 aaPredicted RBP8.36□□□□□ -1.07
COMMD9-207ENST00000533308 FAM200BP0CF97 657 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 SKILP12757 684 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 CYP11B1P15538 503 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 NPR3P17342 541 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 CHRNB2P17787 502 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 ELF1P32519 619 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 GRIK1P39086 918 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 CCR2P41597 374 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 STAT1P42224 750 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 MAGEA11P43364 429 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 PGFP49763 221 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 RGS7P49802 495 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 PDE4CQ08493 712 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 TBX2Q13207 712 aaPredicted RBP8.36□□□□□ -1.07
COMMD9-207ENST00000533308 PLD1Q13393 1074 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 ARID5BQ14865 1188 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 PKDCCQ504Y2 493 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 FIGNQ5HY92 759 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 PPM1LQ5SGD2 360 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 POTEHQ6S545 545 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 C4orf50Q6ZRC1 276 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 TMC8Q8IU68 726 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 TTC39CQ8N584 583 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 SPC24Q8NBT2 197 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 SCAMP5Q8TAC9 235 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 C2orf15Q8WU43 125 aaKnown RBP8.36□□□□□ -1.07
COMMD9-207ENST00000533308 ZNF606Q8WXB4 792 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 SECISBP2LQ93073 1101 aaKnown RBP8.36□□□□□ -1.07
COMMD9-207ENST00000533308 MRFAP1L1Q96HT8 127 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 FUBP3Q96I24 572 aaKnown RBP eCLIP8.36□□□□□ -1.07
COMMD9-207ENST00000533308 S1PR5Q9H228 398 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 SFXN1Q9H9B4 322 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 ABCB6Q9NP58 842 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 DMAP1Q9NPF5 467 aaPredicted RBP8.36□□□□□ -1.07
COMMD9-207ENST00000533308 CAPN11Q9UMQ6 739 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 C5orf42Q9H799 3197 aa8.36□□□□□ -1.07
COMMD9-207ENST00000533308 HELZP42694 1942 aaKnown RBP8.35□□□□□ -1.07
COMMD9-207ENST00000533308 DOCK8Q8NF50 2099 aa8.35□□□□□ -1.07
COMMD9-207ENST00000533308 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.35□□□□□ -1.07
COMMD9-207ENST00000533308 A0A1W2PQJ5 194 aa8.35□□□□□ -1.07
COMMD9-207ENST00000533308 GRXCR2A6NFK2 248 aa8.35□□□□□ -1.07
COMMD9-207ENST00000533308 SLC38A8A6NNN8 435 aa8.35□□□□□ -1.07
COMMD9-207ENST00000533308 MFAP3LO75121 409 aa8.35□□□□□ -1.07
COMMD9-207ENST00000533308 HMGA1P17096 107 aaKnown RBP8.35□□□□□ -1.07
COMMD9-207ENST00000533308 GJA1P17302 382 aa8.35□□□□□ -1.07
COMMD9-207ENST00000533308 SP100P23497 879 aaPredicted RBP8.35□□□□□ -1.07
COMMD9-207ENST00000533308 PDE6CP51160 858 aa8.35□□□□□ -1.07
COMMD9-207ENST00000533308 SLC5A3P53794 718 aa8.35□□□□□ -1.07
COMMD9-207ENST00000533308 ADKP55263 362 aaKnown RBP8.35□□□□□ -1.07
COMMD9-207ENST00000533308 FMO1Q01740 532 aa8.35□□□□□ -1.07
COMMD9-207ENST00000533308 MAPRE1Q15691 268 aaKnown RBP8.35□□□□□ -1.07
COMMD9-207ENST00000533308 ASIC2Q16515 512 aa8.35□□□□□ -1.07
COMMD9-207ENST00000533308 SLC5A9Q2M3M2 681 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms