RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 PNPLA4P41247 253 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 ZNF131P52739 623 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 WNT7BP56706 349 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 POSTNQ15063 836 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 CRY1Q16526 586 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 ARL6IP4Q66PJ3 421 aaKnown RBP13.98□□□□□ -0.17
COPB1-209ENST00000533096 TMEM92Q6UXU6 159 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 LPCAT2Q7L5N7 544 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 ZNF720Q7Z2F6 126 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 C11orf74Q86VG3 221 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 OSTM1Q86WC4 334 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 SFTPA1Q8IWL2 248 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 ALLCQ8N6M5 410 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 TXNDC5Q8NBS9 432 aaKnown RBP13.98□□□□□ -0.17
COPB1-209ENST00000533096 MDGA1Q8NFP4 955 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 CCDC26Q8TAB7 109 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 MYRFLQ96LU7 910 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 NUSAP1Q9BXS6 441 aaKnown RBP13.98□□□□□ -0.17
COPB1-209ENST00000533096 SLC32A1Q9H598 525 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 TMEM206Q9H813 350 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 FSCN3Q9NQT6 498 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 TMEM74BQ9NUR3 256 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 SMPD4Q9NXE4 827 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 GCNT4Q9P109 453 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 MAGEC2Q9UBF1 373 aaPredicted RBP13.98□□□□□ -0.17
COPB1-209ENST00000533096 KIF3AQ9Y496 699 aa13.98□□□□□ -0.17
COPB1-209ENST00000533096 CHD8Q9HCK8 2581 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 TRIP11Q15643 1979 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 LEFTY2O00292 366 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 CFIP05156 583 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 BDNFP23560 247 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 ADSSP30520 456 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 DDIT3P35638 169 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 OPRD1P41143 372 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 ATXN3P54252 364 aaPredicted RBP13.97□□□□□ -0.17
COPB1-209ENST00000533096 PSMC1P62191 440 aaKnown RBP13.97□□□□□ -0.17
COPB1-209ENST00000533096 GRIN1Q05586 938 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 KCNA1Q09470 495 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 SFR1Q86XK3 245 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 SYCP3Q8IZU3 236 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 ERLEC1Q96DZ1 483 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 CNOT6LQ96LI5 555 aaKnown RBP13.97□□□□□ -0.17
COPB1-209ENST00000533096 AK8Q96MA6 479 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 FIZ1Q96SL8 496 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 GTPBP2Q9BX10 602 aaKnown RBP13.97□□□□□ -0.17
COPB1-209ENST00000533096 CCSER1Q9C0I3 900 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 PCIF1Q9H4Z3 704 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 MRPL44Q9H9J2 332 aaKnown RBP13.97□□□□□ -0.17
COPB1-209ENST00000533096 TRPM5Q9NZQ8 1165 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 WASF3Q9UPY6 502 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 STYXL1Q9Y6J8 313 aa13.97□□□□□ -0.17
COPB1-209ENST00000533096 NEFLP07196 543 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 HNRNPLP14866 589 aaKnown RBP eCLIP13.96□□□□□ -0.17
COPB1-209ENST00000533096 LMO2P25791 158 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 ABCD1P33897 745 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 PTGER3P43115 390 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 SIM1P81133 766 aaPredicted RBP13.96□□□□□ -0.17
COPB1-209ENST00000533096 RBP5P82980 135 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 ZXDBP98169 803 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 CYP27A1Q02318 531 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 LMAN2Q12907 356 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 FILIP1Q7Z7B0 1213 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 ADGRF2Q8IZF7 708 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 ADGRG2Q8IZP9 1017 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 TMEM86AQ8N2M4 240 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 C1orf127Q8N9H9 656 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 HMGB4Q8WW32 186 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 ZCCHC14Q8WYQ9 949 aaKnown RBP13.96□□□□□ -0.17
COPB1-209ENST00000533096 KCNN1Q92952 543 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 TRMT2BQ96GJ1 504 aaKnown RBP13.96□□□□□ -0.17
COPB1-209ENST00000533096 PNKPQ96T60 521 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 RNF38Q9H0F5 515 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 ABCB6Q9NP58 842 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 MMP17Q9ULZ9 603 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 LHX6Q9UPM6 363 aa13.96□□□□□ -0.17
COPB1-209ENST00000533096 ATXN2Q99700 1313 aaKnown RBP13.95□□□□□ -0.18
COPB1-209ENST00000533096 SGK1O00141 431 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 ENGP17813 658 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 ANXA13P27216 316 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 PCSK1P29120 753 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 LHX1P48742 406 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 USP46P62068 366 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 MRPS21P82921 87 aaKnown RBP13.95□□□□□ -0.18
COPB1-209ENST00000533096 RING1Q06587 406 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 MESP2Q0VG99 397 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 IFRD2Q12894 506 aaPredicted RBP13.95□□□□□ -0.18
COPB1-209ENST00000533096 USP4Q13107 963 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 DHCR24Q15392 516 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 SOWAHAQ2M3V2 549 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 LMBRD2Q68DH5 695 aaPredicted RBP13.95□□□□□ -0.18
COPB1-209ENST00000533096 LRSAM1Q6UWE0 723 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 HS2ST1Q7LGA3 356 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 RASSF3Q86WH2 238 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 NT5DC4Q86YG4 428 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 NAT16Q8N8M0 369 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 LARP4BQ92615 738 aaKnown RBP13.95□□□□□ -0.18
COPB1-209ENST00000533096 GATA6Q92908 595 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 ACCSQ96QU6 501 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 FNBP1Q96RU3 617 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 PANK2Q9BZ23 570 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms