RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 PSMC3IPQ9P2W1 217 aaPredicted RBP15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 ANKRD65E5RJM6 399 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 F5H5T6 163 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 CXCL11O14625 94 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 CST8O60676 142 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 PTGER2P43116 358 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 LRRC8EQ6NSJ5 796 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 TLK2Q86UE8 772 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 WDCPQ9H6R7 721 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 FOXN3O00409 490 aaPredicted RBP15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 KCNJ1P48048 391 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 MFSD10Q14728 455 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 E4F1Q66K89 784 aaPredicted RBP15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 CLEC17AQ6ZS10 378 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 FAM71DQ8N9W8 422 aa15.38■□□□□ 0.05
PCDHA9-202ENST00000532602 ALDH1A2O94788 518 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 CKMP06732 381 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 NFE2Q16621 373 aaPredicted RBP15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 HIST2H2ACQ16777 129 aaPredicted RBP15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 CTXN3Q4LDR2 81 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 HIST2H2AA3Q6FI13 130 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 TRIM48Q8IWZ4 208 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 VPS37AQ8NEZ2 397 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 DNERQ8NFT8 737 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 VPS33BQ9H267 617 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 SFMBT1Q9UHJ3 866 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 ARHGAP26Q9UNA1 814 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 TBKBP1A7MCY6 615 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 KCNT1Q5JUK3 1230 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 UGT3A1Q6NUS8 523 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 FBXO32Q969P5 355 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 GPATCH2LQ9NWQ4 482 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 DBR1Q9UK59 544 aaKnown RBP15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 CHMP2BQ9UQN3 213 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 MBL2P11226 248 aaPredicted RBP15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 CDH2P19022 906 aaPredicted RBP15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 ZNF280DQ6N043 979 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 RGS9BPQ6ZS82 235 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 USP50Q70EL3 339 aaPredicted RBP15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 HOMEZQ8IX15 550 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 TRPM4Q8TD43 1214 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 FAM161BQ96MY7 647 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 TASP1Q9H6P5 420 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 GTF3C4Q9UKN8 822 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 PLSCR1O15162 318 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 STRNO43815 780 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 VDRP11473 427 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 INPP5AQ14642 412 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 THP07101 528 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 GHRP10912 638 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 PTGISQ16647 500 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 ZRANB3Q5FWF4 1079 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 FAXCQ5TGI0 409 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 RFX8Q6ZV50 586 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 SNX31Q8N9S9 440 aa15.37■□□□□ 0.05
PCDHA9-202ENST00000532602 ZBTB17Q13105 803 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 AARS2Q5JTZ9 985 aaKnown RBP15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 ACAD10Q6JQN1 1059 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 HS6ST3Q8IZP7 471 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 PRPF18Q99633 342 aaKnown RBP15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 XPNPEP3Q9NQH7 507 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 RIC8BQ9NVN3 520 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 APOA4P06727 396 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 WEE1P30291 646 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 GEMP55040 296 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 EVX2Q03828 476 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 STX3Q13277 289 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 CARNMT1Q8N4J0 409 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 RFWD2Q8NHY2 731 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 EMILIN2Q9BXX0 1053 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 RBM12Q9NTZ6 932 aaKnown RBP15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 KANSL3Q9P2N6 904 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 CLASP2O75122 1294 aaKnown RBP15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 FBXO21O94952 628 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 ARIH2O95376 493 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 TGFB3P10600 412 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 PPP3CCP48454 512 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 MYL6P60660 151 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 FLOT2Q14254 428 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 NTRK3Q16288 839 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 CYP4F11Q9HBI6 524 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 GTPBP10A4D1E9 387 aaKnown RBP15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 TTLL13PA6NNM8 815 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 MYL2P10916 166 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 PTPRAP18433 802 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 CHRM3P20309 590 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 RAB27AP51159 221 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 SLC47A2Q86VL8 602 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 RIN2Q8WYP3 895 aaPredicted RBP15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 C9orf72Q96LT7 481 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 MTG1Q9BT17 334 aaPredicted RBP15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 ADAM21Q9UKJ8 722 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 PCDHB12Q9Y5F1 795 aa15.36■□□□□ 0.05
PCDHA9-202ENST00000532602 MEFVO15553 781 aaPredicted RBP15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 STIP1P31948 543 aaKnown RBP15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 PEX19P40855 299 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms