RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 IFNAR2P48551 515 aa18.58■□□□□ 0.56
PKP3-208ENST00000531857 MYL7Q01449 175 aa18.58■□□□□ 0.56
PKP3-208ENST00000531857 ELF2Q15723 593 aa18.58■□□□□ 0.56
PKP3-208ENST00000531857 TMEM86AQ8N2M4 240 aa18.58■□□□□ 0.56
PKP3-208ENST00000531857 CSGALNACT2Q8N6G5 542 aa18.58■□□□□ 0.56
PKP3-208ENST00000531857 EDEM2Q9BV94 578 aa18.58■□□□□ 0.56
PKP3-208ENST00000531857 TMEM206Q9H813 350 aa18.58■□□□□ 0.56
PKP3-208ENST00000531857 MRPL44Q9H9J2 332 aaKnown RBP18.58■□□□□ 0.56
PKP3-208ENST00000531857 SNX9Q9Y5X1 595 aa18.58■□□□□ 0.56
PKP3-208ENST00000531857 CEP192Q8TEP8 1941 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 GOLGA8IPA6NC78 632 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 MYMKA6NI61 221 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 GOLGA8JA6NMD2 632 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 C4orf47A7E2U8 309 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 ATP2C2O75185 946 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 RHOBTB1O94844 696 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 CAVIN2O95810 425 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 HSP90AA1P07900 732 aaKnown RBP18.57■□□□□ 0.56
PKP3-208ENST00000531857 GBP1P32455 592 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 CASP5P51878 434 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 DGKEP52429 567 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 ZXDBP98169 803 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 CFAP221Q4G0U5 840 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 L1TD1Q5T7N2 865 aaKnown RBP18.57■□□□□ 0.56
PKP3-208ENST00000531857 SPATA2LQ8IUW3 424 aaPredicted RBP18.57■□□□□ 0.56
PKP3-208ENST00000531857 SCN4BQ8IWT1 228 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 LRRC52Q8N7C0 313 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 SH3RF2Q8TEC5 729 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 EXOC4Q96A65 974 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 ACDQ96AP0 544 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 DNAJC19Q96DA6 116 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 GDAP2Q9NXN4 497 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 RBAKQ9NYW8 714 aaPredicted RBP18.57■□□□□ 0.56
PKP3-208ENST00000531857 SIX4Q9UIU6 781 aa18.57■□□□□ 0.56
PKP3-208ENST00000531857 GABRDO14764 452 aa18.56■□□□□ 0.56
PKP3-208ENST00000531857 BMP15O95972 392 aa18.56■□□□□ 0.56
PKP3-208ENST00000531857 KRT19P08727 400 aa18.56■□□□□ 0.56
PKP3-208ENST00000531857 SEC13P55735 322 aa18.56■□□□□ 0.56
PKP3-208ENST00000531857 SOWAHAQ2M3V2 549 aa18.56■□□□□ 0.56
PKP3-208ENST00000531857 LARP1BQ659C4 914 aaKnown RBP18.56■□□□□ 0.56
PKP3-208ENST00000531857 ADGRF2Q8IZF7 708 aa18.56■□□□□ 0.56
PKP3-208ENST00000531857 CACTINQ8WUQ7 758 aaKnown RBP18.56■□□□□ 0.56
PKP3-208ENST00000531857 ACCSQ96QU6 501 aa18.56■□□□□ 0.56
PKP3-208ENST00000531857 CBWD1Q9BRT8 395 aa18.56■□□□□ 0.56
PKP3-208ENST00000531857 FGFBP2Q9BYJ0 223 aa18.56■□□□□ 0.56
PKP3-208ENST00000531857 TPSD1Q9BZJ3 242 aa18.56■□□□□ 0.56
PKP3-208ENST00000531857 PDE11AQ9HCR9 933 aa18.56■□□□□ 0.56
PKP3-208ENST00000531857 ITGA11Q9UKX5 1188 aa18.56■□□□□ 0.56
PKP3-208ENST00000531857 EXOC7Q9UPT5 735 aa18.56■□□□□ 0.56
PKP3-208ENST00000531857 SMC3Q9UQE7 1217 aa18.56■□□□□ 0.56
PKP3-208ENST00000531857 LNP1A1A4G5 178 aa18.55■□□□□ 0.56
PKP3-208ENST00000531857 K7EQS6 105 aa18.55■□□□□ 0.56
PKP3-208ENST00000531857 HDCP19113 662 aa18.55■□□□□ 0.56
PKP3-208ENST00000531857 PTMSP20962 102 aa18.55■□□□□ 0.56
PKP3-208ENST00000531857 OPRD1P41143 372 aa18.55■□□□□ 0.56
PKP3-208ENST00000531857 NOVA1P51513 510 aaKnown RBP18.55■□□□□ 0.56
PKP3-208ENST00000531857 GAB4Q2WGN9 574 aa18.55■□□□□ 0.56
PKP3-208ENST00000531857 C2orf27AQ580R0 203 aa18.55■□□□□ 0.56
PKP3-208ENST00000531857 FAM171BQ6P995 826 aa18.55■□□□□ 0.56
PKP3-208ENST00000531857 TOP6BLQ8N6T0 577 aa18.55■□□□□ 0.56
PKP3-208ENST00000531857 TSTD1Q8NFU3 115 aa18.55■□□□□ 0.56
PKP3-208ENST00000531857 USP33Q8TEY7 942 aa18.55■□□□□ 0.56
PKP3-208ENST00000531857 MTMR12Q9C0I1 747 aa18.55■□□□□ 0.56
PKP3-208ENST00000531857 PCIF1Q9H4Z3 704 aa18.55■□□□□ 0.56
PKP3-208ENST00000531857 SEL1LQ9UBV2 794 aa18.55■□□□□ 0.56
PKP3-208ENST00000531857 STK17AQ9UEE5 414 aa18.55■□□□□ 0.56
PKP3-208ENST00000531857 CLIC4Q9Y696 253 aa18.55■□□□□ 0.56
PKP3-208ENST00000531857 PATE3B3GLJ2 98 aa18.54■□□□□ 0.56
PKP3-208ENST00000531857 GCNT3O95395 438 aa18.54■□□□□ 0.56
PKP3-208ENST00000531857 BCKDHBP21953 392 aa18.54■□□□□ 0.56
PKP3-208ENST00000531857 GARTP22102 1010 aa18.54■□□□□ 0.56
PKP3-208ENST00000531857 LMO2P25791 158 aa18.54■□□□□ 0.56
PKP3-208ENST00000531857 PI4KAP42356 2102 aa18.54■□□□□ 0.56
PKP3-208ENST00000531857 LHX1P48742 406 aa18.54■□□□□ 0.56
PKP3-208ENST00000531857 PSMC1P62191 440 aaKnown RBP18.54■□□□□ 0.56
PKP3-208ENST00000531857 RBP5P82980 135 aa18.54■□□□□ 0.56
PKP3-208ENST00000531857 NR1H3Q13133 447 aa18.54■□□□□ 0.56
PKP3-208ENST00000531857 KCNB1Q14721 858 aa18.54■□□□□ 0.56
PKP3-208ENST00000531857 PMS2CLQ68D20 193 aa18.54■□□□□ 0.56
PKP3-208ENST00000531857 LMBRD2Q68DH5 695 aaPredicted RBP18.54■□□□□ 0.56
PKP3-208ENST00000531857 BRAPQ7Z569 592 aa18.54■□□□□ 0.56
PKP3-208ENST00000531857 FSIP1Q8NA03 581 aa18.54■□□□□ 0.56
PKP3-208ENST00000531857 NOC3LQ8WTT2 800 aaKnown RBP18.54■□□□□ 0.56
PKP3-208ENST00000531857 KBTBD7Q8WVZ9 684 aa18.54■□□□□ 0.56
PKP3-208ENST00000531857 FUBP3Q96I24 572 aaKnown RBP eCLIP18.54■□□□□ 0.56
PKP3-208ENST00000531857 ARHGAP26Q9UNA1 814 aa18.54■□□□□ 0.56
PKP3-208ENST00000531857 ADAMTS9Q9P2N4 1935 aa18.54■□□□□ 0.56
PKP3-208ENST00000531857 PLXND1Q9Y4D7 1925 aa18.54■□□□□ 0.56
PKP3-208ENST00000531857 MYO18AQ92614 2054 aaKnown RBP18.54■□□□□ 0.56
PKP3-208ENST00000531857 PTPRJQ12913 1337 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 ASCC3Q8N3C0 2202 aaKnown RBP18.53■□□□□ 0.56
PKP3-208ENST00000531857 C1QTNF9BB2RNN3 333 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 LDHAP00338 332 aaKnown RBP18.53■□□□□ 0.56
PKP3-208ENST00000531857 PROS1P07225 676 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 C1QTNF9P0C862 333 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 TCF3P15923 654 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 GAP43P17677 238 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 PCSK1P29120 753 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 MAGEA11P43364 429 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 USP46P62068 366 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms