RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 OTOL1A6NHN0 477 aaPredicted RBP17.99■□□□□ 0.47
CPSF1-207ENST00000531727 CHURC1-FNTBB4DL54 471 aa17.99■□□□□ 0.47
CPSF1-207ENST00000531727 CST3P01034 146 aaPredicted RBP17.99■□□□□ 0.47
CPSF1-207ENST00000531727 PDGFRBP09619 1106 aa17.99■□□□□ 0.47
CPSF1-207ENST00000531727 USP17L7P0C7H9 530 aa17.99■□□□□ 0.47
CPSF1-207ENST00000531727 FNTBP49356 437 aa17.99■□□□□ 0.47
CPSF1-207ENST00000531727 FAM160A1Q05DH4 1040 aa17.99■□□□□ 0.47
CPSF1-207ENST00000531727 DMWDQ09019 674 aa17.99■□□□□ 0.47
CPSF1-207ENST00000531727 CUL4BQ13620 913 aa17.99■□□□□ 0.47
CPSF1-207ENST00000531727 PDGFRLQ15198 375 aa17.99■□□□□ 0.47
CPSF1-207ENST00000531727 VSTM1Q6UX27 236 aa17.99■□□□□ 0.47
CPSF1-207ENST00000531727 C12orf56Q8IXR9 622 aa17.99■□□□□ 0.47
CPSF1-207ENST00000531727 FSIP1Q8NA03 581 aa17.99■□□□□ 0.47
CPSF1-207ENST00000531727 CCDC127Q96BQ5 260 aa17.99■□□□□ 0.47
CPSF1-207ENST00000531727 CHFRQ96EP1 664 aa17.99■□□□□ 0.47
CPSF1-207ENST00000531727 CEP295NLQ96MC4 621 aa17.99■□□□□ 0.47
CPSF1-207ENST00000531727 SLC39A2Q9NP94 309 aa17.99■□□□□ 0.47
CPSF1-207ENST00000531727 C2orf42Q9NWW7 574 aa17.99■□□□□ 0.47
CPSF1-207ENST00000531727 DLL3Q9NYJ7 618 aa17.99■□□□□ 0.47
CPSF1-207ENST00000531727 CFAP45Q9UL16 551 aa17.99■□□□□ 0.47
CPSF1-207ENST00000531727 HELZP42694 1942 aaKnown RBP17.98■□□□□ 0.47
CPSF1-207ENST00000531727 TRDMT1O14717 391 aaKnown RBP17.98■□□□□ 0.47
CPSF1-207ENST00000531727 TACC1O75410 805 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 CKMP06732 381 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 FAM163BP0C2L3 166 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 ARSAP15289 507 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 BDNFP23560 247 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 HOXA6P31267 233 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 CNR2P34972 360 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 AFMP43652 599 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 AMPD2Q01433 879 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 CYP27A1Q02318 531 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 GRSF1Q12849 480 aaKnown RBP eCLIP17.98■□□□□ 0.47
CPSF1-207ENST00000531727 USP4Q13107 963 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 MTF1Q14872 753 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 LAIR1Q6GTX8 287 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 FSTL4Q6MZW2 842 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 DGLUCYQ7Z3D6 616 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 LONP2Q86WA8 852 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 MYCBPAPQ8TBZ2 947 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 SLC22A12Q96S37 553 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 CYP2S1Q96SQ9 504 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 MRPL45Q9BRJ2 306 aaKnown RBP17.98■□□□□ 0.47
CPSF1-207ENST00000531727 GZF1Q9H116 711 aaPredicted RBP17.98■□□□□ 0.47
CPSF1-207ENST00000531727 SNX25Q9H3E2 840 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 GCNT4Q9P109 453 aa17.98■□□□□ 0.47
CPSF1-207ENST00000531727 HRO43593 1189 aa17.97■□□□□ 0.47
CPSF1-207ENST00000531727 TGM1P22735 817 aa17.97■□□□□ 0.47
CPSF1-207ENST00000531727 GNL1P36915 607 aaPredicted RBP17.97■□□□□ 0.47
CPSF1-207ENST00000531727 GRIK1P39086 918 aa17.97■□□□□ 0.47
CPSF1-207ENST00000531727 TNNC1P63316 161 aa17.97■□□□□ 0.47
CPSF1-207ENST00000531727 DNM1Q05193 864 aaKnown RBP17.97■□□□□ 0.47
CPSF1-207ENST00000531727 PKP1Q13835 747 aa17.97■□□□□ 0.47
CPSF1-207ENST00000531727 SIM2Q14190 667 aaPredicted RBP17.97■□□□□ 0.47
CPSF1-207ENST00000531727 ZNF77Q15935 545 aa17.97■□□□□ 0.47
CPSF1-207ENST00000531727 LPAL2Q16609 132 aa17.97■□□□□ 0.47
CPSF1-207ENST00000531727 KNOP1Q1ED39 458 aaKnown RBP17.97■□□□□ 0.47
CPSF1-207ENST00000531727 RSPO4Q2I0M5 234 aaPredicted RBP17.97■□□□□ 0.47
CPSF1-207ENST00000531727 WDR72Q3MJ13 1102 aa17.97■□□□□ 0.47
CPSF1-207ENST00000531727 MDH1BQ5I0G3 518 aa17.97■□□□□ 0.47
CPSF1-207ENST00000531727 HEATR6Q6AI08 1181 aaKnown RBP17.97■□□□□ 0.47
CPSF1-207ENST00000531727 PRR23BQ6ZRT6 265 aa17.97■□□□□ 0.47
CPSF1-207ENST00000531727 CEP57L1Q8IYX8 460 aa17.97■□□□□ 0.47
CPSF1-207ENST00000531727 ARL14EPQ8N8R7 260 aaPredicted RBP17.97■□□□□ 0.47
CPSF1-207ENST00000531727 ZNF516Q92618 1163 aa17.97■□□□□ 0.47
CPSF1-207ENST00000531727 PCED1BQ96HM7 432 aa17.97■□□□□ 0.47
CPSF1-207ENST00000531727 DUS2Q9NX74 493 aaKnown RBP17.97■□□□□ 0.47
CPSF1-207ENST00000531727 NME7Q9Y5B8 376 aa17.97■□□□□ 0.47
CPSF1-207ENST00000531727 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.96■□□□□ 0.47
CPSF1-207ENST00000531727 C2orf78A6NCI8 922 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 TRIM66O15016 1216 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 STAU1O95793 577 aaKnown RBP17.96■□□□□ 0.47
CPSF1-207ENST00000531727 ANXA13P27216 316 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 LMNB2Q03252 620 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 TRPC3Q13507 836 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 KCNB1Q14721 858 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 PKN3Q6P5Z2 889 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 DENND5BQ6ZUT9 1274 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 GRAMD1CQ8IYS0 662 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 CPA6Q8N4T0 437 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 OR6B3Q8NGW1 331 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 OSCP1Q8WVF1 389 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 ATP2A3Q93084 1043 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 ECT2Q9H8V3 914 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 PARD6AQ9NPB6 346 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 EHD2Q9NZN4 543 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 SERTAD1Q9UHV2 236 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 RCOR1Q9UKL0 485 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 USP18Q9UMW8 372 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 DNAH14Q0VDD8 3507 aa17.96■□□□□ 0.47
CPSF1-207ENST00000531727 GPR179Q6PRD1 2367 aa17.95■□□□□ 0.46
CPSF1-207ENST00000531727 PRR5-ARHGAP8B1AHC4 643 aa17.95■□□□□ 0.46
CPSF1-207ENST00000531727 KLRC4O43908 158 aa17.95■□□□□ 0.46
CPSF1-207ENST00000531727 EXOC3O60645 756 aa17.95■□□□□ 0.46
CPSF1-207ENST00000531727 RETP07949 1114 aa17.95■□□□□ 0.46
CPSF1-207ENST00000531727 SLFN14P0C7P3 912 aa17.95■□□□□ 0.46
CPSF1-207ENST00000531727 TCF3P15923 654 aa17.95■□□□□ 0.46
CPSF1-207ENST00000531727 PFKLP17858 780 aa17.95■□□□□ 0.46
CPSF1-207ENST00000531727 HDCP19113 662 aa17.95■□□□□ 0.46
CPSF1-207ENST00000531727 SDHBP21912 280 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms