RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 DAAM1Q9Y4D1 1078 aa16.25■□□□□ 0.19
CCS-206ENST00000530961 PCDHB4Q9Y5E5 795 aa16.25■□□□□ 0.19
CCS-206ENST00000530961 TRIM66O15016 1216 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 SERPINC1P01008 464 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 PAEPP09466 180 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 BDNFP23560 247 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 GRIK1P39086 918 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 ORC1Q13415 861 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 CCDC142Q17RM4 750 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 TMEM270Q6UE05 265 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 FUKQ8N0W3 1084 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 C12orf29Q8N999 325 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 SLC4A11Q8NBS3 891 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 KAT5Q92993 513 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 PSMG2Q969U7 264 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 SMARCD1Q96GM5 515 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 C8orf48Q96LL4 319 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 ERGIC2Q96RQ1 377 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 LPIN3Q9BQK8 851 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 MED10Q9BTT4 135 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 SIX2Q9NPC8 291 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 RTN4Q9NQC3 1192 aaKnown RBP16.24■□□□□ 0.19
CCS-206ENST00000530961 AVENQ9NQS1 362 aaPredicted RBP16.24■□□□□ 0.19
CCS-206ENST00000530961 CEP72Q9P209 647 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 DNAJC12Q9UKB3 198 aa16.24■□□□□ 0.19
CCS-206ENST00000530961 UCHL3P15374 230 aa16.23■□□□□ 0.19
CCS-206ENST00000530961 ATF6P18850 670 aa16.23■□□□□ 0.19
CCS-206ENST00000530961 CDR1P51861 262 aa16.23■□□□□ 0.19
CCS-206ENST00000530961 TAF12Q16514 161 aa16.23■□□□□ 0.19
CCS-206ENST00000530961 CYP4A22Q5TCH4 519 aa16.23■□□□□ 0.19
CCS-206ENST00000530961 ARHGAP17Q68EM7 881 aa16.23■□□□□ 0.19
CCS-206ENST00000530961 DPY19L2P1Q6NXN4 242 aa16.23■□□□□ 0.19
CCS-206ENST00000530961 PAQR9Q6ZVX9 377 aa16.23■□□□□ 0.19
CCS-206ENST00000530961 GRASPQ7Z6J2 395 aaPredicted RBP16.23■□□□□ 0.19
CCS-206ENST00000530961 DNAJB7Q7Z6W7 309 aaPredicted RBP16.23■□□□□ 0.19
CCS-206ENST00000530961 SLC2A14Q8TDB8 520 aa16.23■□□□□ 0.19
CCS-206ENST00000530961 SPATA17Q96L03 361 aa16.23■□□□□ 0.19
CCS-206ENST00000530961 PHF7Q9BWX1 381 aaPredicted RBP16.23■□□□□ 0.19
CCS-206ENST00000530961 LSM14BQ9BX40 385 aaKnown RBP16.23■□□□□ 0.19
CCS-206ENST00000530961 ZNF518BQ9C0D4 1074 aa16.23■□□□□ 0.19
CCS-206ENST00000530961 DNMT3BQ9UBC3 853 aaKnown RBP16.23■□□□□ 0.19
CCS-206ENST00000530961 PRKAG3Q9UGI9 489 aa16.23■□□□□ 0.19
CCS-206ENST00000530961 SIK3Q9Y2K2 1263 aa16.23■□□□□ 0.19
CCS-206ENST00000530961 A0A1B0GTH6 734 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 CLDN5O00501 218 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 ZNF197O14709 1029 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 SOAT2O75908 522 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 FGF19O95750 216 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 RHOP08100 348 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 CSH1P0DML2 217 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 CSH2P0DML3 217 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 VDRP11473 427 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 KRT5P13647 590 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 CCDC130P13994 396 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 ANXA13P27216 316 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 ZNF132P52740 706 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 EPHA5P54756 1037 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 FANCCQ00597 558 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 APBA1Q02410 837 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 SYCP1Q15431 976 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 DDR2Q16832 855 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 PABPC1LQ4VXU2 614 aaKnown RBP16.22■□□□□ 0.19
CCS-206ENST00000530961 SGO2Q562F6 1265 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 GJB7Q6PEY0 223 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 FAM35AQ86V20 835 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 SCN4BQ8IWT1 228 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 RBBP8NLQ8NC74 664 aaPredicted RBP16.22■□□□□ 0.19
CCS-206ENST00000530961 SHC3Q92529 594 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 POMKQ9H5K3 350 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 DMAP1Q9NPF5 467 aaPredicted RBP16.22■□□□□ 0.19
CCS-206ENST00000530961 ASAH2Q9NR71 780 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 FAM49BQ9NUQ9 324 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 EHD2Q9NZN4 543 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 USTQ9Y2C2 406 aa16.22■□□□□ 0.19
CCS-206ENST00000530961 CLUHO75153 1309 aa16.21■□□□□ 0.19
CCS-206ENST00000530961 BAHCC1Q9P281 2608 aa16.21■□□□□ 0.19
CCS-206ENST00000530961 ANK1P16157 1881 aa16.21■□□□□ 0.19
CCS-206ENST00000530961 RNF225M0QZC1 329 aaPredicted RBP16.21■□□□□ 0.19
CCS-206ENST00000530961 MICAL2O94851 1124 aa16.21■□□□□ 0.19
CCS-206ENST00000530961 FAM200BP0CF97 657 aa16.21■□□□□ 0.19
CCS-206ENST00000530961 IL9P15248 144 aa16.21■□□□□ 0.19
CCS-206ENST00000530961 CD19P15391 556 aa16.21■□□□□ 0.19
CCS-206ENST00000530961 ID4P47928 161 aa16.21■□□□□ 0.19
CCS-206ENST00000530961 NR1I3Q14994 352 aa16.21■□□□□ 0.19
CCS-206ENST00000530961 STILQ15468 1287 aa16.21■□□□□ 0.19
CCS-206ENST00000530961 ARHGAP44Q17R89 818 aa16.21■□□□□ 0.19
CCS-206ENST00000530961 PDZD4Q76G19 769 aaPredicted RBP16.21■□□□□ 0.19
CCS-206ENST00000530961 GIPC2Q8TF65 315 aa16.21■□□□□ 0.19
CCS-206ENST00000530961 PCMTD1Q96MG8 357 aaPredicted RBP16.21■□□□□ 0.19
CCS-206ENST00000530961 NAP1L5Q96NT1 182 aaPredicted RBP16.21■□□□□ 0.19
CCS-206ENST00000530961 CORO1BQ9BR76 489 aa16.21■□□□□ 0.19
CCS-206ENST00000530961 NAA15Q9BXJ9 866 aaKnown RBP16.21■□□□□ 0.19
CCS-206ENST00000530961 STK33Q9BYT3 514 aa16.21■□□□□ 0.19
CCS-206ENST00000530961 IRF2BPLQ9H1B7 796 aa16.21■□□□□ 0.19
CCS-206ENST00000530961 CSNK1G1Q9HCP0 422 aa16.21■□□□□ 0.19
CCS-206ENST00000530961 KRT82Q9NSB4 513 aa16.21■□□□□ 0.19
CCS-206ENST00000530961 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCS-206ENST00000530961 CDH22Q9UJ99 828 aa16.21■□□□□ 0.19
CCS-206ENST00000530961 MYO7AQ13402 2215 aa16.21■□□□□ 0.18
CCS-206ENST00000530961 PDCD11Q14690 1871 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms