RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 HIPK3Q9H422 1215 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 CNTN3Q9P232 1028 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 PSMD13Q9UNM6 376 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 DOLKQ9UPQ8 538 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 FRMD4BQ9Y2L6 1034 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 AP4B1Q9Y6B7 739 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 TXNDC9O14530 226 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 LRRN2O75325 713 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 KCNJ1P48048 391 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 NR1D2Q14995 579 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 MOGQ16653 247 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 KRT25Q7Z3Z0 450 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 LSMEM2Q8N112 164 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 TERB1Q8NA31 727 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 ZNF420Q8TAQ5 688 aaPredicted RBP8.49□□□□□ -1.05
CSDE1-214ENST00000530886 HM13Q8TCT9 377 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 TRUB1Q8WWH5 349 aaKnown RBP8.49□□□□□ -1.05
CSDE1-214ENST00000530886 GCNAQ96QF7 691 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 POP1Q99575 1024 aaKnown RBP8.49□□□□□ -1.05
CSDE1-214ENST00000530886 NUF2Q9BZD4 464 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 RABGEF1Q9UJ41 708 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 ERGIC3Q9Y282 383 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 RABGAP1Q9Y3P9 1069 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 SLC30A1Q9Y6M5 507 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 BPTFQ12830 3046 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 UBAP1LF5GYI3 381 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 TOM1O60784 492 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 SERPINA6P08185 405 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 POLR2MP0CAP2 368 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 ATP6V1B1P15313 513 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 RAG1P15918 1043 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 KRT15P19012 456 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 HOXD10P28358 340 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 ETV4P43268 484 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 TXNL4AP83876 142 aaKnown RBP8.49□□□□□ -1.05
CSDE1-214ENST00000530886 OVGP1Q12889 678 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 GRM4Q14833 912 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 LRRC41Q15345 812 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 PUS10Q3MIT2 529 aaKnown RBP8.49□□□□□ -1.05
CSDE1-214ENST00000530886 C6orf183Q5T699 404 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 TTC23LQ6PF05 361 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 GLYCTKQ8IVS8 523 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 SLC7A5P1Q8MH63 180 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 C4orf33Q8N1A6 199 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 PQLC1Q8N2U9 271 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 TBC1D15Q8TC07 691 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 CCDC138Q96M89 665 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 PLVAPQ9BX97 442 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 WWP1Q9H0M0 922 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 STRIP2Q9ULQ0 834 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 CAPN8A6NHC0 703 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 MCF2LO15068 1137 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 SIN3BO75182 1162 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 ENO1P06733 434 aaKnown RBP8.48□□□□□ -1.05
CSDE1-214ENST00000530886 COMTP21964 271 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 ADSSP30520 456 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 MXI1P50539 228 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 ZNF200P98182 395 aaPredicted RBP8.48□□□□□ -1.05
CSDE1-214ENST00000530886 PSMD6Q15008 389 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 KCNJ8Q15842 424 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 HSF5Q4G112 596 aaPredicted RBP8.48□□□□□ -1.05
CSDE1-214ENST00000530886 VASH1Q7L8A9 365 aaPredicted RBP8.48□□□□□ -1.05
CSDE1-214ENST00000530886 PRUNE1Q86TP1 453 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 PPM1KQ8N3J5 372 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 MIGA1Q8NAN2 632 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 TSPAN14Q8NG11 270 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 MED30Q96HR3 178 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 IMPG2Q9BZV3 1241 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 DNAJC17Q9NVM6 304 aaKnown RBP8.48□□□□□ -1.05
CSDE1-214ENST00000530886 EPS15L1Q9UBC2 864 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 CRNNQ9UBG3 495 aaPredicted RBP8.48□□□□□ -1.05
CSDE1-214ENST00000530886 DCAF8L1A6NGE4 600 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 ZBTB11O95625 1053 aaPredicted RBP8.48□□□□□ -1.05
CSDE1-214ENST00000530886 SERPINB6P35237 376 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 SLC1A1P43005 524 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 DLG4P78352 724 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 CYTH1Q15438 398 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 CCNG2Q16589 344 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 LRRC36Q1X8D7 754 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 RGS21Q2M5E4 152 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 KCTD21Q4G0X4 260 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 SGO2Q562F6 1265 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 FRA10AC1Q70Z53 315 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 EEPD1Q7L9B9 569 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 DYMQ7RTS9 669 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 CHERPQ8IWX8 916 aaKnown RBP8.48□□□□□ -1.05
CSDE1-214ENST00000530886 OR7G1Q8NGA0 311 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 TMOD2Q9NZR1 351 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 ITGA11Q9UKX5 1188 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 CENPBD1B2RD01 187 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 XPOTO43592 962 aaKnown RBP8.48□□□□□ -1.05
CSDE1-214ENST00000530886 FARP2O94887 1054 aaPredicted RBP8.48□□□□□ -1.05
CSDE1-214ENST00000530886 KRT4P19013 534 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 RFX1P22670 979 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 RRM1P23921 792 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 TECP42680 631 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 ACADSBP45954 432 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 SLC5A3P53794 718 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 UBE4AQ14139 1066 aa8.48□□□□□ -1.05
CSDE1-214ENST00000530886 RARS2Q5T160 578 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms