RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 TMEM134Q9H6X4 195 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 TMLHEQ9NVH6 421 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 DUS2Q9NX74 493 aaKnown RBP3.81□□□□□ -1.8
PTPRC-213ENST00000529828 LRWD1Q9UFC0 647 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 EBF1Q9UH73 591 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 TBX20Q9UMR3 447 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 GPSM3Q9Y4H4 160 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 HECTD1Q9ULT8 2610 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 CITO14578 2027 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 NAV2Q8IVL1 2488 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 TTC26A0AVF1 554 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 K7EQS6 105 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 CYB561D2O14569 222 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 HCRTO43612 131 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 PRPF40AO75400 957 aaKnown RBP3.81□□□□□ -1.8
PTPRC-213ENST00000529828 F11P03951 625 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 CLTAP09496 248 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 MAPTP10636 758 aaKnown RBP3.81□□□□□ -1.8
PTPRC-213ENST00000529828 HAPLN1P10915 354 aaPredicted RBP3.81□□□□□ -1.8
PTPRC-213ENST00000529828 TYMPP19971 482 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 ITPKAP23677 461 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 TUFMP49411 452 aaKnown RBP3.81□□□□□ -1.8
PTPRC-213ENST00000529828 ATXN3P54252 364 aaPredicted RBP3.81□□□□□ -1.8
PTPRC-213ENST00000529828 LILRA4P59901 499 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 AMPD2Q01433 879 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 MCL1Q07820 350 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 PDGFRLQ15198 375 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 ZNF77Q15935 545 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 ME3Q16798 604 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 EML3Q32P44 896 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 FBXO43Q4G163 708 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 GLIPR1L2Q4G1C9 344 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 TTC38Q5R3I4 469 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 WSCD1Q658N2 575 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 RINT1Q6NUQ1 792 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 CENPQQ7L2Z9 268 aaPredicted RBP3.81□□□□□ -1.8
PTPRC-213ENST00000529828 LPCAT2Q7L5N7 544 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 PIP4P1Q86T03 277 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 MARCH9Q86YJ5 346 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 PGBD3Q8N328 593 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 ALLCQ8N6M5 410 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 TMEM161BQ8NDZ6 487 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 USP33Q8TEY7 942 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 OSCP1Q8WVF1 389 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 HMGB4Q8WW32 186 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 MRPS31Q92665 395 aaKnown RBP3.81□□□□□ -1.8
PTPRC-213ENST00000529828 GTF3C6Q969F1 213 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 CRELD1Q96HD1 420 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 LRIG1Q96JA1 1093 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 FAM84AQ96KN4 292 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 DRC1Q96MC2 740 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 NAP1L5Q96NT1 182 aaPredicted RBP3.81□□□□□ -1.8
PTPRC-213ENST00000529828 FNBP1Q96RU3 617 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 PYM1Q9BRP8 204 aaKnown RBP3.81□□□□□ -1.8
PTPRC-213ENST00000529828 TM6SF1Q9BZW5 370 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 LINC00597Q9H2U6 94 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 RAXQ9Y2V3 346 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 ASXL3Q9C0F0 2248 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 TSC2P49815 1807 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 THADAQ6YHU6 1953 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 ATMQ13315 3056 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 NUP205Q92621 2012 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 TCRBV21S2A2A0A5A6 115 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 C2orf78A6NCI8 922 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 TISP43B9A030 160 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 SGK1O00141 431 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 SH3BP5O60239 455 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 KLF8O95600 359 aaPredicted RBP3.8□□□□□ -1.8
PTPRC-213ENST00000529828 PRB1P04280 392 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 ACAT1P24752 427 aaKnown RBP3.8□□□□□ -1.8
PTPRC-213ENST00000529828 WEE1P30291 646 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 OPRD1P41143 372 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 SLC6A11P48066 632 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 LIG4P49917 911 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 KDSRQ06136 332 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 ST3GAL1Q11201 340 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 LMAN2Q12907 356 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 USP4Q13107 963 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 SEMA3BQ13214 749 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 SAFBQ15424 915 aaKnown RBP eCLIP3.8□□□□□ -1.8
PTPRC-213ENST00000529828 ZBTB6Q15916 424 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 CRY1Q16526 586 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 EMC10Q5UCC4 262 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 SPATA1Q5VX52 437 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 C9orf57Q5W0N0 161 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 LYSMD4Q5XG99 296 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 C1orf186Q6ZWK4 172 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 MON1AQ86VX9 555 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 RASSF3Q86WH2 238 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 HDDC3Q8N4P3 179 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 ARL14EPQ8N8R7 260 aaPredicted RBP3.8□□□□□ -1.8
PTPRC-213ENST00000529828 TXNDC5Q8NBS9 432 aaKnown RBP3.8□□□□□ -1.8
PTPRC-213ENST00000529828 SH3RF2Q8TEC5 729 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 ATP2A3Q93084 1043 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 SPACA7Q96KW9 195 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 CNOT6LQ96LI5 555 aaKnown RBP3.8□□□□□ -1.8
PTPRC-213ENST00000529828 MSTO1Q9BUK6 570 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 OXCT2Q9BYC2 517 aaPredicted RBP3.8□□□□□ -1.8
PTPRC-213ENST00000529828 IKZF4Q9H2S9 585 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 RPF1Q9H9Y2 349 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms