RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 STT3AP46977 705 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 PTH2RP49190 550 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 CLCN2P51788 898 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 MAPK10P53779 464 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 WNT3P56703 355 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 DAG1Q14118 895 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 HLTFQ14527 1009 aaKnown RBP eCLIP5.67□□□□□ -1.5
CTR9-204ENST00000529355 KCNAB1Q14722 419 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 NPY5RQ15761 445 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 TBCCQ15814 346 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 DEPDC1Q5TB30 811 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 SUPT20HQ8NEM7 779 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 RFKQ969G6 155 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 ZBTB45Q96K62 511 aaPredicted RBP5.67□□□□□ -1.5
CTR9-204ENST00000529355 AGAP2Q99490 1192 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 FOXJ2Q9P0K8 574 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 DNMT3BQ9UBC3 853 aaKnown RBP5.67□□□□□ -1.5
CTR9-204ENST00000529355 HDAC9Q9UKV0 1011 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 ST3GAL5Q9UNP4 418 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 SHOC2Q9UQ13 582 aa5.67□□□□□ -1.5
CTR9-204ENST00000529355 FER1L4A9Z1Z3 1794 aa5.66□□□□□ -1.5
CTR9-204ENST00000529355 A0A087WZ62 844 aa5.66□□□□□ -1.5
CTR9-204ENST00000529355 SOAT2O75908 522 aa5.66□□□□□ -1.5
CTR9-204ENST00000529355 IL18RAPO95256 599 aa5.66□□□□□ -1.5
CTR9-204ENST00000529355 PARP1P09874 1014 aaKnown RBP5.66□□□□□ -1.5
CTR9-204ENST00000529355 TYRP1P17643 537 aa5.66□□□□□ -1.5
CTR9-204ENST00000529355 BTF3P20290 206 aaKnown RBP5.66□□□□□ -1.5
CTR9-204ENST00000529355 PTDSS1P48651 473 aaKnown RBP5.66□□□□□ -1.5
CTR9-204ENST00000529355 CARSP49589 748 aaKnown RBP5.66□□□□□ -1.5
CTR9-204ENST00000529355 MPP3Q13368 585 aa5.66□□□□□ -1.5
CTR9-204ENST00000529355 ICE2Q659A1 982 aa5.66□□□□□ -1.5
CTR9-204ENST00000529355 PEG10Q86TG7 708 aaKnown RBP5.66□□□□□ -1.5
CTR9-204ENST00000529355 CCDC33Q8N5R6 958 aa5.66□□□□□ -1.5
CTR9-204ENST00000529355 DNAJB14Q8TBM8 379 aa5.66□□□□□ -1.5
CTR9-204ENST00000529355 GLG1Q92896 1179 aa5.66□□□□□ -1.5
CTR9-204ENST00000529355 FKBP10Q96AY3 582 aa5.66□□□□□ -1.5
CTR9-204ENST00000529355 CHFRQ96EP1 664 aa5.66□□□□□ -1.5
CTR9-204ENST00000529355 COQ10AQ96MF6 247 aa5.66□□□□□ -1.5
CTR9-204ENST00000529355 STRBPQ96SI9 672 aaKnown RBP5.66□□□□□ -1.5
CTR9-204ENST00000529355 UNKQ9C0B0 810 aaKnown RBP5.66□□□□□ -1.5
CTR9-204ENST00000529355 IL17RBQ9NRM6 502 aa5.66□□□□□ -1.5
CTR9-204ENST00000529355 DMRT1Q9Y5R6 373 aa5.66□□□□□ -1.5
CTR9-204ENST00000529355 SNX14Q9Y5W7 946 aa5.66□□□□□ -1.5
CTR9-204ENST00000529355 A0A087X1B8 175 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 AGPSO00116 658 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 CYR61O00622 381 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 RAMP2O60895 175 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 NR2F6P10588 404 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 CYP2C9P11712 490 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 JUPP14923 745 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 TNFSF4P23510 183 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 KLRC1P26715 233 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 PCSK6P29122 969 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 TM4SF4P48230 202 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 SIM1P81133 766 aaPredicted RBP5.65□□□□□ -1.5
CTR9-204ENST00000529355 DPTQ07507 201 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 E2F2Q14209 437 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 PTPRRQ15256 657 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 MGAT5BQ3V5L5 792 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 SLC44A4Q53GD3 710 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 FAM209BQ5JX69 171 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 CACHD1Q5VU97 1274 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 KAZNQ674X7 775 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 CCSAPQ6IQ19 270 aaPredicted RBP5.65□□□□□ -1.5
CTR9-204ENST00000529355 HIBCHQ6NVY1 386 aaPredicted RBP5.65□□□□□ -1.5
CTR9-204ENST00000529355 USP51Q70EK9 711 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 MRGPRGQ86SM5 289 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 AMER2Q8N7J2 671 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 SVIPQ8NHG7 77 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 RIPOR3Q96MK2 946 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 MOGAT1Q96PD6 335 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 BRIP1Q9BX63 1249 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 SYNPO2LQ9H987 977 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 XPNPEP3Q9NQH7 507 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 KLC4Q9NSK0 619 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 PACSIN3Q9UKS6 424 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.65□□□□□ -1.5
CTR9-204ENST00000529355 CDY1Q9Y6F8 540 aa5.65□□□□□ -1.5
CTR9-204ENST00000529355 TMEM191CA6NGB0 347 aa5.64□□□□□ -1.51
CTR9-204ENST00000529355 ZAR1LA6NP61 321 aa5.64□□□□□ -1.51
CTR9-204ENST00000529355 RRP9O43818 475 aaKnown RBP5.64□□□□□ -1.51
CTR9-204ENST00000529355 SRGAP2O75044 1071 aa5.64□□□□□ -1.51
CTR9-204ENST00000529355 RASAL1O95294 804 aa5.64□□□□□ -1.51
CTR9-204ENST00000529355 FESP07332 822 aa5.64□□□□□ -1.51
CTR9-204ENST00000529355 HGFP14210 728 aa5.64□□□□□ -1.51
CTR9-204ENST00000529355 PPIFP30405 207 aaKnown RBP5.64□□□□□ -1.51
CTR9-204ENST00000529355 LRPAP1P30533 357 aa5.64□□□□□ -1.51
CTR9-204ENST00000529355 PRKAG1P54619 331 aa5.64□□□□□ -1.51
CTR9-204ENST00000529355 MRPS35P82673 323 aaKnown RBP5.64□□□□□ -1.51
CTR9-204ENST00000529355 ITIH3Q06033 890 aa5.64□□□□□ -1.51
CTR9-204ENST00000529355 PICALMQ13492 652 aa5.64□□□□□ -1.51
CTR9-204ENST00000529355 PMS2P11Q13670 270 aa5.64□□□□□ -1.51
CTR9-204ENST00000529355 ZNF169Q14929 603 aaPredicted RBP5.64□□□□□ -1.51
CTR9-204ENST00000529355 TREML2Q5T2D2 321 aa5.64□□□□□ -1.51
CTR9-204ENST00000529355 OLFML1Q6UWY5 402 aa5.64□□□□□ -1.51
CTR9-204ENST00000529355 SRLQ86TD4 932 aa5.64□□□□□ -1.51
CTR9-204ENST00000529355 SLC15A3Q8IY34 581 aa5.64□□□□□ -1.51
CTR9-204ENST00000529355 ATP11CQ8NB49 1132 aa5.64□□□□□ -1.51
CTR9-204ENST00000529355 ACTRT2Q8TDY3 377 aa5.64□□□□□ -1.51
CTR9-204ENST00000529355 KIAA1191Q96A73 305 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms