RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 ANKRD52Q8NB46 1076 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 KREMEN2Q8NCW0 462 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 VN1R2Q8NFZ6 395 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 UBA3Q8TBC4 463 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 PDLIM2Q96JY6 352 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 GAS2L1Q99501 681 aaPredicted RBP12.13□□□□□ -0.47
CAPN1-217ENST00000529133 SEPT5Q99719 369 aaPredicted RBP12.13□□□□□ -0.47
CAPN1-217ENST00000529133 SMOQ99835 787 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 AGPAT1Q99943 283 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 HAUS4Q9H6D7 363 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 MAN1C1Q9NR34 630 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 ARHGAP20Q9P2F6 1191 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 HSFX1Q9UBD0 423 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 HESX1Q9UBX0 185 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 PCDHGC3Q9UN70 934 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 YIPF1Q9Y548 306 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 HCFC2Q9Y5Z7 792 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 TRIOBPQ9H2D6 2365 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 PRRG1O14668 218 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 BEST1O76090 585 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 PLEKP08567 350 aaPredicted RBP12.12□□□□□ -0.47
CAPN1-217ENST00000529133 SETSIPP0DME0 302 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 NPR3P17342 541 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 FECHP22830 423 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 ELF1P32519 619 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 GPR15P49685 360 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 BCAT1P54687 386 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 GSDMDP57764 484 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 PDE4CQ08493 712 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 KCNC3Q14003 757 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 TSR1Q2NL82 804 aaKnown RBP12.12□□□□□ -0.47
CAPN1-217ENST00000529133 MGAT5BQ3V5L5 792 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 TDRD12Q587J7 1177 aaKnown RBP12.12□□□□□ -0.47
CAPN1-217ENST00000529133 LLGL2Q6P1M3 1020 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 CLEC20AQ6ZU45 233 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 CCDC186Q7Z3E2 898 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 PASD1Q8IV76 773 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 DEFB123Q8N688 67 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 ZMIZ2Q8NF64 920 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 SLC7A14Q8TBB6 771 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 MYLIPQ8WY64 445 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 SECISBP2LQ93073 1101 aaKnown RBP12.12□□□□□ -0.47
CAPN1-217ENST00000529133 C8orf48Q96LL4 319 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 GUCD1Q96NT3 240 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 PANX2Q96RD6 677 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 PCDHB18PQ96TA0 734 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 CDX2Q99626 313 aaPredicted RBP12.12□□□□□ -0.47
CAPN1-217ENST00000529133 DUSP16Q9BY84 665 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 CSNK1G1Q9HCP0 422 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 DMAP1Q9NPF5 467 aaPredicted RBP12.12□□□□□ -0.47
CAPN1-217ENST00000529133 ZNHIT6Q9NWK9 470 aaKnown RBP12.12□□□□□ -0.47
CAPN1-217ENST00000529133 INSL5Q9Y5Q6 135 aa12.12□□□□□ -0.47
CAPN1-217ENST00000529133 BZW2Q9Y6E2 419 aaKnown RBP12.12□□□□□ -0.47
CAPN1-217ENST00000529133 PLXNA3P51805 1871 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 F8VP50 259 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 TULP2O00295 520 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 TRIM66O15016 1216 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 LINC01565O15544 149 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 GLP2RO95838 553 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 C8AP07357 584 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 ATF6P18850 670 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 CDH5P33151 784 aaPredicted RBP12.11□□□□□ -0.47
CAPN1-217ENST00000529133 GRIK1P39086 918 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 TUFMP49411 452 aaKnown RBP12.11□□□□□ -0.47
CAPN1-217ENST00000529133 MAP3K7CLP57077 242 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 RPL10AP62906 217 aaKnown RBP12.11□□□□□ -0.47
CAPN1-217ENST00000529133 CDK17Q00537 523 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 BST2Q10589 180 aaKnown RBP12.11□□□□□ -0.47
CAPN1-217ENST00000529133 LIN9Q5TKA1 542 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 SDHAF4Q5VUM1 108 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 TRIM72Q6ZMU5 477 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 CCDC149Q6ZUS6 474 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 SCN4BQ8IWT1 228 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 EFHBQ8N7U6 833 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 C1orf131Q8NDD1 294 aaKnown RBP12.11□□□□□ -0.47
CAPN1-217ENST00000529133 HDAC7Q8WUI4 952 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 KCNK16Q96T55 309 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 CHP1Q99653 195 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 LHX5Q9H2C1 402 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 PDCL3Q9H2J4 239 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 PLEKHA4Q9H4M7 779 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 IGFLR1Q9H665 355 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 MTMR10Q9NXD2 777 aa12.11□□□□□ -0.47
CAPN1-217ENST00000529133 HHLA1C9JL84 531 aa12.1□□□□□ -0.47
CAPN1-217ENST00000529133 DDX3XO00571 662 aaKnown RBP eCLIP12.1□□□□□ -0.473e-11■■■■■ 33.2
CAPN1-217ENST00000529133 XPO1O14980 1071 aaKnown RBP12.1□□□□□ -0.47
CAPN1-217ENST00000529133 ZMYND10O75800 440 aa12.1□□□□□ -0.47
CAPN1-217ENST00000529133 LSM8O95777 96 aaKnown RBP12.1□□□□□ -0.47
CAPN1-217ENST00000529133 CYP1A1P04798 512 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-217ENST00000529133 TNFAIP3P21580 790 aa12.1□□□□□ -0.47
CAPN1-217ENST00000529133 ANXA13P27216 316 aa12.1□□□□□ -0.47
CAPN1-217ENST00000529133 EIF4A3P38919 411 aaKnown RBP12.1□□□□□ -0.47
CAPN1-217ENST00000529133 GPD2P43304 727 aa12.1□□□□□ -0.47
CAPN1-217ENST00000529133 PLA2G4AP47712 749 aa12.1□□□□□ -0.47
CAPN1-217ENST00000529133 SLC8A3P57103 927 aa12.1□□□□□ -0.47
CAPN1-217ENST00000529133 NOMO3P69849 1222 aa12.1□□□□□ -0.47
CAPN1-217ENST00000529133 CCDC173Q0VFZ6 552 aa12.1□□□□□ -0.47
CAPN1-217ENST00000529133 TWF1Q12792 350 aa12.1□□□□□ -0.47
CAPN1-217ENST00000529133 MAPK8IP2Q13387 824 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-217ENST00000529133 PLD1Q13393 1074 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms