RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 MYL6P60660 151 aa12.36□□□□□ -0.43
SRPRA-203ENST00000528744 RPL10AP62906 217 aaKnown RBP12.36□□□□□ -0.43
SRPRA-203ENST00000528744 PSMD6Q15008 389 aa12.36□□□□□ -0.43
SRPRA-203ENST00000528744 ZNF77Q15935 545 aa12.36□□□□□ -0.43
SRPRA-203ENST00000528744 DGKKQ5KSL6 1271 aa12.36□□□□□ -0.43
SRPRA-203ENST00000528744 SPATA2LQ8IUW3 424 aaPredicted RBP12.36□□□□□ -0.43
SRPRA-203ENST00000528744 WDR49Q8IV35 697 aa12.36□□□□□ -0.43
SRPRA-203ENST00000528744 MRPS31Q92665 395 aaKnown RBP12.36□□□□□ -0.43
SRPRA-203ENST00000528744 TRMT2BQ96GJ1 504 aaKnown RBP12.36□□□□□ -0.43
SRPRA-203ENST00000528744 PCED1BQ96HM7 432 aa12.36□□□□□ -0.43
SRPRA-203ENST00000528744 FAM126AQ9BYI3 521 aaPredicted RBP12.36□□□□□ -0.43
SRPRA-203ENST00000528744 RNF38Q9H0F5 515 aa12.36□□□□□ -0.43
SRPRA-203ENST00000528744 CUEDC2Q9H467 287 aa12.36□□□□□ -0.43
SRPRA-203ENST00000528744 TRPC7Q9HCX4 862 aa12.36□□□□□ -0.43
SRPRA-203ENST00000528744 NCDNQ9UBB6 729 aa12.36□□□□□ -0.43
SRPRA-203ENST00000528744 MAGEC2Q9UBF1 373 aaPredicted RBP12.36□□□□□ -0.43
SRPRA-203ENST00000528744 CDH9Q9ULB4 789 aa12.36□□□□□ -0.43
SRPRA-203ENST00000528744 WNT6Q9Y6F9 365 aa12.36□□□□□ -0.43
SRPRA-203ENST00000528744 PATJQ8NI35 1801 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 CLDN5O00501 218 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 ACTN4O43707 911 aaKnown RBP12.35□□□□□ -0.43
SRPRA-203ENST00000528744 TNNC2P02585 160 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 TNNI1P19237 187 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 DDX6P26196 483 aaKnown RBP eCLIP12.35□□□□□ -0.43
SRPRA-203ENST00000528744 PCSK1P29120 753 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 GJA4P35212 333 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 GNL1P36915 607 aaPredicted RBP12.35□□□□□ -0.43
SRPRA-203ENST00000528744 AVPR1AP37288 418 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 MAGEA11P43364 429 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 DLG4P78352 724 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 PLCB2Q00722 1185 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 AMPD3Q01432 767 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 SPEM2Q0P670 501 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 ZNF268Q14587 947 aaPredicted RBP12.35□□□□□ -0.43
SRPRA-203ENST00000528744 SURF1Q15526 300 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 BMT2Q1RMZ1 405 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 GAB4Q2WGN9 574 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 PAQR9Q6ZVX9 377 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 ERMP1Q7Z2K6 904 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 XXYLT1Q8NBI6 393 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 KIAA0895Q8NCT3 520 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 SPATA18Q8TC71 538 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 PAGE5Q96GU1 130 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 MSANTD3Q96H12 275 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 FUBP3Q96I24 572 aaKnown RBP eCLIP12.35□□□□□ -0.43
SRPRA-203ENST00000528744 GCNAQ96QF7 691 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 MMS19Q96T76 1030 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 CGRRF1Q99675 332 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 B3GNT5Q9BYG0 378 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 LRRC27Q9C0I9 530 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 SDCBP2Q9H190 292 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 ECT2Q9H8V3 914 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 DMAC2Q9NW81 257 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 THG1LQ9NWX6 298 aaKnown RBP12.35□□□□□ -0.43
SRPRA-203ENST00000528744 SPTBN2O15020 2390 aa12.35□□□□□ -0.43
SRPRA-203ENST00000528744 CACNA1AO00555 2505 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 NCOR2Q9Y618 2525 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 A0A1B0GVL5 298 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 PVALEFA0A1B0GWK0 134 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 SCAMP3O14828 347 aaKnown RBP12.34□□□□□ -0.43
SRPRA-203ENST00000528744 TACC1O75410 805 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 VNN1O95497 513 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 C4BPAP04003 597 aaKnown RBP12.34□□□□□ -0.43
SRPRA-203ENST00000528744 PTPN1P18031 435 aaKnown RBP12.34□□□□□ -0.43
SRPRA-203ENST00000528744 GRIK1P39086 918 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 ME1P48163 572 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 PGFP49763 221 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 CYP27A1Q02318 531 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 FAM160A1Q05DH4 1040 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 MESP2Q0VG99 397 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 MYO1EQ12965 1108 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 LRRC32Q14392 662 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 MTF1Q14872 753 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 KNOP1Q1ED39 458 aaKnown RBP12.34□□□□□ -0.43
SRPRA-203ENST00000528744 EML3Q32P44 896 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 WDR72Q3MJ13 1102 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 MDH1BQ5I0G3 518 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 C1orf220Q5T0J3 134 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 PRR23BQ6ZRT6 265 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 SFTPA1Q8IWL2 248 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 C12orf56Q8IXR9 622 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 TTC16Q8NEE8 873 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 OR6B3Q8NGW1 331 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 MYCBPAPQ8TBZ2 947 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 SH3RF2Q8TEC5 729 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 SPATA17Q96L03 361 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 IER2Q9BTL4 223 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 ZNF518BQ9C0D4 1074 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 KIAA1586Q9HCI6 787 aa12.34□□□□□ -0.43
SRPRA-203ENST00000528744 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.34□□□□□ -0.43
SRPRA-203ENST00000528744 ZNF840PA6NDX5 716 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 LRRIQ3A6PVS8 624 aaPredicted RBP12.33□□□□□ -0.44
SRPRA-203ENST00000528744 SOBPA7XYQ1 873 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 F8VP50 259 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 HAX1O00165 279 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 RNF40O75150 1001 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 HDCP19113 662 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 RAP1GAPP47736 663 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 NRLP54845 237 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 USP4Q13107 963 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms