RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 C11orf70Q9BRQ4 267 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 ZDHHC7Q9NXF8 308 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 PLA2G4CQ9UP65 541 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 A0A088AWK7 358 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 EML1O00423 815 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 SMARCA1P28370 1054 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 GPSM2P81274 684 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 FAAP100Q0VG06 881 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 ZCCHC23Q6ZST2 131 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 LPCAT2Q7L5N7 544 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 HPS6Q86YV9 775 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 APOPT1Q96IL0 206 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 DCUN1D5Q9BTE7 237 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 OXCT2Q9BYC2 517 aaPredicted RBP13.04□□□□□ -0.32
TSKU-203ENST00000527881 EPB41L1Q9H4G0 881 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 RRN3Q9NYV6 651 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 AP4B1Q9Y6B7 739 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 TBC1D12O60347 775 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 STT3AP46977 705 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 TAS2R40P59535 323 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 SNAP25P60880 206 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 GSTO1P78417 241 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 TBL3Q12788 808 aaKnown RBP13.04□□□□□ -0.32
TSKU-203ENST00000527881 PEX6Q13608 980 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 ERFEQ4G0M1 354 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 RARS2Q5T160 578 aaKnown RBP13.04□□□□□ -0.32
TSKU-203ENST00000527881 C3orf67Q6ZVT6 689 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 VTI1AQ96AJ9 217 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 CSRNP1Q96S65 589 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 ZMPSTE24O75844 475 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 LDHCP07864 332 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 FAM58BPP0C7Q3 252 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 STIP1P31948 543 aaKnown RBP13.04□□□□□ -0.32
TSKU-203ENST00000527881 BTDP43251 543 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 BASP1P80723 227 aaKnown RBP13.04□□□□□ -0.32
TSKU-203ENST00000527881 NANOGNBQ7Z5D8 188 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 RSPH3Q86UC2 560 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 TXNRD3Q86VQ6 643 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 PDIK1LQ8N165 341 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 SERAC1Q96JX3 654 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 SRPK1Q96SB4 655 aaKnown RBP13.04□□□□□ -0.32
TSKU-203ENST00000527881 EBF4Q9BQW3 602 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 PCDHGB4Q9UN71 923 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 PCDHGB5Q9Y5G0 923 aa13.04□□□□□ -0.32
TSKU-203ENST00000527881 KAT6AQ92794 2004 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 ZBTB5O15062 677 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 PDGFRBP09619 1106 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 NELFEP18615 380 aaKnown RBP13.03□□□□□ -0.32
TSKU-203ENST00000527881 HOXD12P35452 270 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 VCPP55072 806 aaKnown RBP13.03□□□□□ -0.32
TSKU-203ENST00000527881 XIAPP98170 497 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 NFX1Q12986 1120 aaKnown RBP13.03□□□□□ -0.32
TSKU-203ENST00000527881 CCNIQ14094 377 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 SEPT6Q14141 434 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 GK3PQ14409 553 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 C6orf52Q5T4I8 152 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 TMEM53Q6P2H8 277 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 RNF111Q6ZNA4 994 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 FAM71AQ8IYT1 594 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 PPM1NQ8N819 430 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 JADE3Q92613 823 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 KREMEN1Q96MU8 473 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 SENP7Q9BQF6 1050 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 DENND3A2RUS2 1198 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 CAPN14A8MX76 684 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 IPO5O00410 1097 aaKnown RBP13.03□□□□□ -0.32
TSKU-203ENST00000527881 LIASO43766 372 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 PEX1O43933 1283 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 CD151P48509 253 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 ENTPD1P49961 510 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 EMP3P54852 163 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 PDK1Q15118 436 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 DLGAP5Q15398 846 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 LIN9Q5TKA1 542 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 ADGRD1Q6QNK2 874 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 KYAT3Q6YP21 454 aaKnown RBP13.03□□□□□ -0.32
TSKU-203ENST00000527881 ZNF720Q7Z2F6 126 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 LRRC43Q8N309 656 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 LMO3Q8TAP4 145 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 DDI1Q8WTU0 396 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 C17orf50Q8WW18 174 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 ERLEC1Q96DZ1 483 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 BTBD9Q96Q07 612 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 UNC45AQ9H3U1 944 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 SSU72Q9NP77 194 aaKnown RBP13.03□□□□□ -0.32
TSKU-203ENST00000527881 INIPQ9NRY2 104 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 FAIMQ9NVQ4 179 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 RSL24D1Q9UHA3 163 aaKnown RBP13.03□□□□□ -0.32
TSKU-203ENST00000527881 APOBEC2Q9Y235 224 aaKnown RBP13.03□□□□□ -0.32
TSKU-203ENST00000527881 CACNA1SQ13698 1873 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 MYH11P35749 1972 aa13.03□□□□□ -0.32
TSKU-203ENST00000527881 TMEM247A6NEH6 219 aa13.02□□□□□ -0.32
TSKU-203ENST00000527881 TRIM49D1C9J1S8 452 aa13.02□□□□□ -0.32
TSKU-203ENST00000527881 BTBD19C9JJ37 291 aa13.02□□□□□ -0.32
TSKU-203ENST00000527881 PORP16435 677 aaPredicted RBP13.02□□□□□ -0.32
TSKU-203ENST00000527881 NR1H2P55055 460 aa13.02□□□□□ -0.32
TSKU-203ENST00000527881 TCEAL1Q15170 157 aa13.02□□□□□ -0.32
TSKU-203ENST00000527881 ZNF276Q8N554 614 aa13.02□□□□□ -0.32
TSKU-203ENST00000527881 NT5C1BQ96P26 610 aa13.02□□□□□ -0.32
TSKU-203ENST00000527881 CBWD1Q9BRT8 395 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms