RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 USP17L7P0C7H9 530 aa13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 TOB1P50616 345 aaPredicted RBP13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 SLC12A3P55017 1021 aa13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 NR1H3Q13133 447 aa13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 SEMA3BQ13214 749 aa13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 DDR2Q16832 855 aa13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 GAB4Q2WGN9 574 aa13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 SLC39A4Q6P5W5 647 aa13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 SYT12Q8IV01 421 aa13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 SFTPA1Q8IWL2 248 aa13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 CD302Q8IX05 232 aa13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 ARL14EPQ8N8R7 260 aaPredicted RBP13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 SYT2Q8N9I0 419 aaPredicted RBP13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 CCDC26Q8TAB7 109 aa13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 OLIG1Q8TAK6 271 aa13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 SH3RF2Q8TEC5 729 aa13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 SPACA7Q96KW9 195 aa13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 PNMA5Q96PV4 448 aa13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 UXTQ9UBK9 157 aaPredicted RBP13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 MBD1Q9UIS9 605 aaPredicted RBP13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 KCNG1Q9UIX4 513 aa13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 GPSM3Q9Y4H4 160 aa13.44□□□□□ -0.26
CCDC90B-205ENST00000525916 MYH10P35580 1976 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 SHROOM3Q8TF72 1996 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 CELSR3Q9NYQ7 3312 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 A0A0B4J269 797 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 C2orf78A6NCI8 922 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 H0YCG3 227 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 K7ENM7 598 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 TNFRSF10BO14763 440 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 MAP3K13O43283 966 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 ALDH1A2O94788 518 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 NOL4O94818 638 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 PIGRP01833 764 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 CAPNS1P04632 268 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 CFIP05156 583 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 PDCP20941 246 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 CYP2F1P24903 491 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 ACOT2P49753 483 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 TSPY1Q01534 308 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 ACACAQ13085 2346 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 CCDC142Q17RM4 750 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 SOWAHCQ53LP3 525 aaPredicted RBP13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 LARP1BQ659C4 914 aaKnown RBP13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 SLC23A3Q6PIS1 610 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 ALLCQ8N6M5 410 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 TXNDC5Q8NBS9 432 aaKnown RBP13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 WHAMMQ8TF30 809 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 TRMT2BQ96GJ1 504 aaKnown RBP13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 GTPBP2Q9BX10 602 aaKnown RBP13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 CCSER1Q9C0I3 900 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 DPP3Q9NY33 737 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 GCNT4Q9P109 453 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 LARSQ9P2J5 1176 aaKnown RBP13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 DERAQ9Y315 318 aa13.43□□□□□ -0.26
CCDC90B-205ENST00000525916 BPTFQ12830 3046 aa13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 UPK3BL1B0FP48 263 aa13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 UPK3BL2E5RIL1 263 aa13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 SGK1O00141 431 aa13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 KLF8O95600 359 aaPredicted RBP13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 NFATC1O95644 943 aa13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 PLA2G4BP0C869 781 aa13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 ITPKAP23677 461 aa13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 ATXN3P54252 364 aaPredicted RBP13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 MESP2Q0VG99 397 aa13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 BECN1Q14457 450 aa13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 NFE2Q16621 373 aaPredicted RBP13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 HYIQ5T013 277 aa13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 LYSMD4Q5XG99 296 aa13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 PDZD3Q86UT5 571 aa13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 HDDC3Q8N4P3 179 aa13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 OR2I1PQ8NGU4 316 aa13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 MYRFLQ96LU7 910 aa13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 ZDHHC4Q9NPG8 344 aa13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 BCCIPQ9P287 314 aaKnown RBP eCLIP13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 PILRBQ9UKJ0 227 aa13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 C2CD2Q9Y426 696 aa13.42□□□□□ -0.26
CCDC90B-205ENST00000525916 SMG1Q96Q15 3661 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 GCN1Q92616 2671 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 FAM221BA6H8Z2 402 aa13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 KPNA7A9QM74 516 aa13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 TISP43B9A030 160 aa13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 H0Y626 953 aa13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 TRIM16O95361 564 aa13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 CHRM1P11229 460 aaPredicted RBP13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 SYT1P21579 422 aa13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 ACAT1P24752 427 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 TIE1P35590 1138 aa13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 PRPHP41219 470 aa13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 RPL10AP62906 217 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 MRPS21P82921 87 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 ZXDBP98169 803 aa13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 SCAPQ12770 1279 aa13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 KCNB1Q14721 858 aa13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 COL28A1Q2UY09 1125 aa13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 MAP7D1Q3KQU3 841 aa13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 SV2CQ496J9 727 aa13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 ARSHQ5FYA8 562 aa13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 PEAR1Q5VY43 1037 aaPredicted RBP13.41□□□□□ -0.26
CCDC90B-205ENST00000525916 LMBRD2Q68DH5 695 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms