RNA–Protein interactions for RNA: ENST00000525036.1

RB1-205, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 3

Gene RB1, Length 1,490 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-205ENST00000525036 SPDYE4A6NLX3 237 aa16.56■□□□□ 0.24
RB1-205ENST00000525036 F8VP50 259 aa16.56■□□□□ 0.24
RB1-205ENST00000525036 AP1G2O75843 785 aa16.56■□□□□ 0.24
RB1-205ENST00000525036 TRIM21P19474 475 aaKnown RBP16.56■□□□□ 0.24
RB1-205ENST00000525036 RFX1P22670 979 aa16.56■□□□□ 0.24
RB1-205ENST00000525036 SOX5P35711 763 aa16.56■□□□□ 0.24
RB1-205ENST00000525036 GRIK1P39086 918 aa16.56■□□□□ 0.24
RB1-205ENST00000525036 MAGEA11P43364 429 aa16.56■□□□□ 0.24
RB1-205ENST00000525036 MAP3K7CLP57077 242 aa16.56■□□□□ 0.24
RB1-205ENST00000525036 CCDC149Q6ZUS6 474 aa16.56■□□□□ 0.24
RB1-205ENST00000525036 FUBP3Q96I24 572 aaKnown RBP eCLIP16.56■□□□□ 0.24
RB1-205ENST00000525036 PRKD2Q9BZL6 878 aa16.56■□□□□ 0.24
RB1-205ENST00000525036 SFXN1Q9H9B4 322 aa16.56■□□□□ 0.24
RB1-205ENST00000525036 DZANK1Q9NVP4 752 aa16.56■□□□□ 0.24
RB1-205ENST00000525036 TSPAN16Q9UKR8 245 aa16.56■□□□□ 0.24
RB1-205ENST00000525036 THAP12O43422 761 aa16.55■□□□□ 0.24
RB1-205ENST00000525036 MICAL2O94851 1124 aa16.55■□□□□ 0.24
RB1-205ENST00000525036 PAPLNO95428 1278 aa16.55■□□□□ 0.24
RB1-205ENST00000525036 GYPCP04921 128 aa16.55■□□□□ 0.24
RB1-205ENST00000525036 GNA15P30679 374 aa16.55■□□□□ 0.24
RB1-205ENST00000525036 TUFMP49411 452 aaKnown RBP16.55■□□□□ 0.24
RB1-205ENST00000525036 ARID5AQ03989 594 aa16.55■□□□□ 0.24
RB1-205ENST00000525036 DENND1BQ6P3S1 775 aa16.55■□□□□ 0.24
RB1-205ENST00000525036 CLEC20AQ6ZU45 233 aa16.55■□□□□ 0.24
RB1-205ENST00000525036 GPRIN1Q7Z2K8 1008 aa16.55■□□□□ 0.24
RB1-205ENST00000525036 CACNA2D4Q7Z3S7 1137 aa16.55■□□□□ 0.24
RB1-205ENST00000525036 NOP9Q86U38 636 aaKnown RBP16.55■□□□□ 0.24
RB1-205ENST00000525036 SLC20A1Q8WUM9 679 aa16.55■□□□□ 0.24
RB1-205ENST00000525036 ZNF606Q8WXB4 792 aa16.55■□□□□ 0.24
RB1-205ENST00000525036 SPAG5Q96R06 1193 aa16.55■□□□□ 0.24
RB1-205ENST00000525036 ZNF334Q9HCZ1 680 aaPredicted RBP16.55■□□□□ 0.24
RB1-205ENST00000525036 DNMT3BQ9UBC3 853 aaKnown RBP16.55■□□□□ 0.24
RB1-205ENST00000525036 HSFX1Q9UBD0 423 aa16.55■□□□□ 0.24
RB1-205ENST00000525036 KIAA1257Q9ULG3 409 aa16.55■□□□□ 0.24
RB1-205ENST00000525036 MTCL1Q9Y4B5 1905 aaKnown RBP16.55■□□□□ 0.24
RB1-205ENST00000525036 LRRC53A6NM62 1247 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 HHLA1C9JL84 531 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 GABBR2O75899 941 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 LRG1P02750 347 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 CYP11B1P15538 503 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 STAT1P42224 750 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 ALDH1A3P47895 512 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 USP46P62068 366 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 CNGA2Q16280 664 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 PKDCCQ504Y2 493 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 FIGNQ5HY92 759 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 TAF3Q5VWG9 929 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 LCLAT1Q6UWP7 414 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 VSTM1Q6UX27 236 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 IRF2BP2Q7Z5L9 587 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 GRASPQ7Z6J2 395 aaPredicted RBP16.54■□□□□ 0.24
RB1-205ENST00000525036 GPR149Q86SP6 731 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 ANKRD52Q8NB46 1076 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 CMASQ8NFW8 434 aaPredicted RBP16.54■□□□□ 0.24
RB1-205ENST00000525036 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.54■□□□□ 0.24
RB1-205ENST00000525036 DDX1Q92499 740 aaKnown RBP16.54■□□□□ 0.24
RB1-205ENST00000525036 SMG7Q92540 1137 aaKnown RBP16.54■□□□□ 0.24
RB1-205ENST00000525036 SMARCD1Q96GM5 515 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 C8orf48Q96LL4 319 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 DUSP16Q9BY84 665 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 ADAM7Q9H2U9 754 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 CSNK1G1Q9HCP0 422 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 ZDHHC7Q9NXF8 308 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 CD207Q9UJ71 328 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.54■□□□□ 0.24
RB1-205ENST00000525036 ITIH6Q6UXX5 1313 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 FSD2A1L4K1 749 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 SLC38A8A6NNN8 435 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 HNRNPA1P09651 372 aaKnown RBP eCLIP16.54■□□□□ 0.24
RB1-205ENST00000525036 FAM200BP0CF97 657 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 SRGAP2BP0DMP2 458 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 HMGA1P17096 107 aaKnown RBP16.54■□□□□ 0.24
RB1-205ENST00000525036 HOXB8P17481 243 aaPredicted RBP16.54■□□□□ 0.24
RB1-205ENST00000525036 CHRNB2P17787 502 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 CASP14P31944 242 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 EPHB3P54753 998 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 PDE4CQ08493 712 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 SPECC1LQ69YQ0 1117 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 POTEHQ6S545 545 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 DNAJB7Q7Z6W7 309 aaPredicted RBP16.54■□□□□ 0.24
RB1-205ENST00000525036 SMRP1Q8NCR6 262 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 SCAMP5Q8TAC9 235 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 LRRC3Q9BY71 257 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 CYTH4Q9UIA0 394 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 NOCTQ9UK39 431 aaKnown RBP16.54■□□□□ 0.24
RB1-205ENST00000525036 CAPN11Q9UMQ6 739 aa16.54■□□□□ 0.24
RB1-205ENST00000525036 PTPRDP23468 1912 aa16.53■□□□□ 0.24
RB1-205ENST00000525036 BRWD1Q9NSI6 2320 aa16.53■□□□□ 0.24
RB1-205ENST00000525036 TNFRSF10BO14763 440 aa16.53■□□□□ 0.24
RB1-205ENST00000525036 TPM3P06753 285 aa16.53■□□□□ 0.24
RB1-205ENST00000525036 NPR3P17342 541 aa16.53■□□□□ 0.24
RB1-205ENST00000525036 HOXA9P31269 272 aa16.53■□□□□ 0.24
RB1-205ENST00000525036 CCR2P41597 374 aa16.53■□□□□ 0.24
RB1-205ENST00000525036 RPL10AP62906 217 aaKnown RBP16.53■□□□□ 0.24
RB1-205ENST00000525036 PTK2Q05397 1052 aa16.53■□□□□ 0.24
RB1-205ENST00000525036 TBX2Q13207 712 aaPredicted RBP16.53■□□□□ 0.24
RB1-205ENST00000525036 TMC6Q7Z403 805 aa16.53■□□□□ 0.24
RB1-205ENST00000525036 PASD1Q8IV76 773 aa16.53■□□□□ 0.24
RB1-205ENST00000525036 WDTC1Q8N5D0 677 aa16.53■□□□□ 0.24
RB1-205ENST00000525036 OLIG1Q8TAK6 271 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms